Rickettsia prowazekii GvV257: MA5_03535
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Entry
MA5_03535 CDS
T01791
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpg
Rickettsia prowazekii GvV257
Pathway
rpg03420
Nucleotide excision repair
rpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MA5_03535
03430 Mismatch repair
MA5_03535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpg03400
]
MA5_03535
Enzymes [BR:
rpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MA5_03535
DNA repair and recombination proteins [BR:
rpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MA5_03535
MMR (mismatch excision repair)
Other MMR factors
MA5_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFE52883
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All DBs
Position
888782..890758
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AA seq
658 aa
AA seq
DB search
MKDKIQNQNFMHTLNAEQKKAALHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLALPHN
ILAVTFTNKAAKEMSERVHNLINCYGLNIGTFHSMAAKILRDQIENLNLGFNNRFTIISH
DDQLTLVKDIVKLKKDIDAKKYTPKLIHIIISRWKDQGLLPNKLSTSDTNLPLQKIAKLI
YEEYQKNLLISNVLDFGDLLLYNNELFIKNPAVLKYYQEKYRYILIDEYQDTNIAQYLWA
RMLASLYRNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAA
SNVINNNKNRHSKTLWTDSSSGEKIKIISCLSDKEEARYIACEIDKLVKEERYNAGNIAI
LVRAGFQTRSFEEAFINSAIPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIIN
VPKRAIGAASLNKIRSYALERNISNFAAIKEILEIGNIKAKSYESLKDLLTKIDNWYEQF
IIDTPINVVKAILDDSGYLAMLKEEKTEEAFGRIENINEMLRAIAEFNDIHDFIEHSSLV
MENEVLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEERRI
AYVGITRAKKDLYITHAESRKIFYEIVRSCPSRFINEIPDEITIRTSSMKQYNSFYKF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaaatacaaaatcaaaatttcatgcatacattaaatgcagaacagaaaaaa
gcagcacttcacactgaaggtccccttttattgctagcaggcgccggaactggtaaaaca
aaagttcttacatcaagaatagctaatattattcatcaaaatttagccttgcctcataat
attctcgccgttacttttactaataaagccgcaaaagaaatgtctgaaagggtccataac
ttaattaattgctatggtctgaatataggtactttccactcaatggcagctaagatatta
cgtgaccaaatcgagaatttaaatcttggttttaataatagatttactataattagtcat
gatgatcaattaactttagttaaagatatagtaaagctaaaaaaggatattgatgccaaa
aaatatacacctaagttaatacatattattatttcaagatggaaagatcagggattatta
ccaaataaattatcaacatcagatactaatttaccactacagaaaatagcaaaacttata
tacgaagaatatcaaaaaaatttacttatttctaatgttttagactttggagatctttta
ctttataacaatgaactttttattaaaaatcctgcagtactaaaatattaccaagaaaaa
tatcgatatattttaatcgatgaatatcaagatactaacattgcgcaatatttatgggca
agaatgctagcaagtttatataggaatatttgttgtgtaggcgatgatgatcaatctatt
tatggttggcgcggagcagaagtcgggaatatactacgttttgaaaaagattttgcaggt
gcaacgattattaaattagaacagaattatagatcaaccttgccaatacttgctgctgct
tccaatgttatcaataataataaaaatcgtcacagtaaaacgctatggacggacagctca
agtggtgaaaagataaaaattatttcttgtttaagtgataaagaagaagcaagatatata
gcatgtgaaatagataagttagttaaagaagaaaggtataatgctggcaatattgcaata
ttagtacgcgcggggtttcaaacaagaagttttgaggaagcttttataaatagtgctata
ccttataaaattataggcggtttacgattctatgaacgtatggaaataagagacgtactt
gcttatatccgtatatctttgaatcaaaatgacaatctagcacttgagcgtattatcaat
gtgccaaaaagagcaataggtgcagctagcctaaataaaattagatcttatgcacttgaa
cgcaatatttctaattttgcagcaattaaagaaatactagaaataggtaatattaaagca
aaatcatatgaatctctaaaagatttacttactaaaattgataattggtatgaacaattt
attatagataccccaataaatgtagttaaagcaatacttgatgattctggttatcttgca
atgctgaaagaagaaaaaactgaagaagcatttggtagaattgaaaatattaatgagatg
cttagagctattgcagaatttaatgatattcatgattttatcgaacattcaagcttagtt
atggaaaatgaagtacttgaaactaattacggtggatctgtgactataatgacactgcac
gcagctaagggactcgaatttgatgtagtatttttacctggatgggaagaaggtgtattt
ccttctcaaagatctctagatgaagatggagaaaaaggcttagaagaagaacgacgtatc
gcttatgttggtattacgagagcaaaaaaagatctttatattactcacgcggaaagcaga
aaaatattttatgaaatagtacgctcttgcccttcaaggttcataaatgaaattcctgat
gaaattacgattagaacatcttctatgaagcaatacaattctttttataagttttga
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