Rickettsia prowazekii GvV257: MA5_03895
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Entry
MA5_03895 CDS
T01791
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rpg
Rickettsia prowazekii GvV257
Pathway
rpg03410
Base excision repair
rpg03430
Mismatch repair
rpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MA5_03895
03430 Mismatch repair
MA5_03895
03440 Homologous recombination
MA5_03895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpg03400
]
MA5_03895
DNA repair and recombination proteins [BR:
rpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MA5_03895
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MA5_03895
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MA5_03895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFE52953
LinkDB
All DBs
Position
complement(993825..995585)
Genome browser
AA seq
586 aa
AA seq
DB search
MKPQISINGKIWKQKPIKEDIVTELCRSFKISDFLARIVSLRVNNLEEVENFLIPKIKNL
LPDPFHLLDMDKAVDRIIQAIVNSQQICIFADYDVDGATSAALLKHFLRDLNIICDIYVP
DRIYEGYGPTPLAMQKIKGNGTELLITVDCGAMAHDALKYAKDVKLDVIVIDHHISTEIL
PDALAIVNPNRIDETSEYKYLAAVGVTFLFATAILSNLKKRNYFSQSIPTPNLMKYLDLV
ALGTVCDMMKLTGLNRAFVTAGLKVMQQRQNIGIKTLYDIAGLDEIPQCYHLGFILGPRI
NAGGRVGKSNLGANLLATNCHNEANKLANELEKHNNERKVIELLMINEAIDIALTQKDSS
LLFVVKEGWHPGVIGIVAGKLKEKFDKPVVVVALNNGIGKASCRSILGIDFSAEIINAKS
KDLIISGGGHAMAAGFTATASKLQELQDFLNDAFSISINKLASYKHAEYDIDLTVNGVNF
RLMEELKTLEPFGPGNYAPIFKFDDLFILKADIVGSKHIKCMLAPDKQYFGNKALSAIVF
DAVGTPFEDILLSSHARHISAIGTLKMNNWKYNYTIQLIIKDILLK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaatatcgataaacggtaaaatatggaaacagaagccaattaaagaagat
atagtaacggaattatgtcgtagttttaaaatcagtgattttcttgctagaatagtatca
ttaagagtaaataatttagaggaagtagaaaattttttgataccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggataaggctgttgatagaatcattcaggct
attgtaaatagtcaacaaatctgtatctttgcagattatgacgtagacggtgctacttca
gcagctttacttaaacatttcttacgagatttaaatatcatatgtgatatttatgtgcct
gatcgtatatatgaaggatatggtccaactcctttggctatgcaaaaaattaaaggtaac
ggcactgaattattaattacggttgattgtggtgctatggcacatgatgcgttgaaatat
gcaaaggatgttaaacttgatgttatagtcattgatcatcatatttctactgaaatatta
ccagatgcactagctatagtaaatccaaatcgtattgatgaaacaagtgaatataaatat
ttggcagcagtaggtgttacgttcttatttgcaactgcaatattatcaaatttaaagaag
cgaaattatttctcgcaaagcataccaactcctaacttaatgaagtatctagatttagtg
gcccttggcactgtttgcgatatgatgaaattaacaggtctaaatcgtgcatttgttaca
gctggattaaaagtaatgcaacaaaggcaaaatatcggtattaaaacattatatgatatt
gcagggcttgatgaaataccgcaatgttatcatttaggctttattttaggtccgcgtatc
aacgcagggggaagagtaggtaaatcaaacttaggtgctaatcttttagctactaattgc
cataatgaagcaaacaaattggctaatgaactggaaaaacataataatgagcgtaaagta
attgaattattaatgatcaacgaggcgatagacattgctttgactcaaaaagacagtagt
ttattatttgttgtgaaagagggatggcatcccggtgttatagggatcgttgcaggaaaa
ttaaaagaaaaatttgataagccagtagtagttgtggctttaaataacggtattggtaaa
gcctcatgtcgttcaattttaggtattgattttagtgctgaaattatcaatgctaaaagt
aaagatttgataatatcaggtggaggtcatgctatggcagcaggatttactgcaactgct
agcaaattacaagaattacaggattttttaaatgatgcttttagcattagtataaataaa
ttagcaagttataaacatgctgaatatgatattgatttaacggttaatggtgtgaatttt
cgtttaatggaggaattaaaaactttagagccttttggtccaggaaattatgcaccaata
tttaaattcgatgatttatttatattaaaagcggatatcgttggaagtaaacatattaaa
tgtatgcttgctccagataaacaatactttggtaataaagcattgtctgctattgtgttt
gatgctgtaggtactccatttgaagatatcttattaagttctcacgcaagacatatttct
gcaataggaacgttgaaaatgaataattggaaatataattatactattcagttaattata
aaagatatacttttaaaatag
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