Rhizobium phaseoli: AMC79_CH00029
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Entry
AMC79_CH00029 CDS
T04590
Name
(GenBank) double-strand break repair helicase AddB type protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH00029
Enzymes [BR:
rpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMC79_CH00029
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AMC79_CH00029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ANL95891
LinkDB
All DBs
Position
complement(27336..30530)
Genome browser
AA seq
1064 aa
AA seq
DB search
MTERHQPRILTIPAGLPFLKTLATTLCDGRLTPLFRHDVDDPLSLAGVTIYLPTRRAARV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDDALPATIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPARLAELGKSSPARHRNAILRAEAVRLSATKPGGPIIIAGST
GSVPATADLIAAVANLREGVIVLPGLDLAMPEEHWQMVAPEPVPGQHANPASRSHPQYGL
SSLLKRLRLTRADVSTLDRPEADLDRRAEILSRTLAPSEATGDWGIWKSELPGGALTSAF
TDVSLIEAANEREEATAIAVALRLALERPGQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSATPQGSLLQLLLEASLRPGDPVAIVSLLKHPLARFGLERNTLIFATEALE
LLALRGGVAEVDISALEPLLTHQLAEQALDRHAPQWRKALSAEAAEAAFELAGRVSRATE
PLAAALVRHRPEDRGKTASFTLSEWAARTGRALEAVAVDPQGNLADLWSNEAGDALASLL
GEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGSWPGQSANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEAFEAELKGRGARFLQWAGLVDRGETQAPAQRPSPKPLRALQPQ
SYSFSEVGRLRRDPYAIYARRILRLDPIDAFNRDPGAAERGTLYHKIIDRFIRAAHVAGT
PEAAAAMELILTELFDMEKLPPHIDAVWRPRFREVARAFLEWEAGRRPAIRRTLTEVRGG
VELEPINIRLNGVADRIDITGPNAADIIDYKTGYNPSPAQARALLDPQLALEAAALRAGA
FRDAGSLTPQDLLYVRLRPGNRFQVDMVNNENAARSDKAKSAIDLAEESVDQLVKFVSLL
QSGEKGFTSRLIPAQQFDFGGDYDHLARVSEWSTAENEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcggcaccagccacgcatcctgacgatcccggcgggccttccctttttgaaa
accctggcgacaacgctgtgcgacggccggttgacgccgcttttccggcatgatgtcgac
gacccgctgtcgctcgccggagtaaccatctacctgccgacccggcgcgccgcgcgcgtg
ctgcgctcggaattcgtcgatctgcttggcggccggtcggcgatcctgccggtcatccgc
cctctcggcgaaaccgacgatgacagcggctatttcgacgacgcgctgccggcgacgatc
gatctcgcccagccgctgtcgaataccgcccgcctgctggaactggcgcgcctgatcctt
gcctggcgaaacaaactgccggagatcgtccgccatattcattcggactcgccgctggtt
gcgccggcaagcccggcggacgcgatctggcttgcccgcaacctcgccgagctgatcgat
tccatcgaaaccgaggatctcgactggtcggaactatcgaagctcgacaccggcgactat
gccgcctggtggcagctgaccgccgagtttctgcagatcgccagcgccttctggccggcg
cggcttgccgaactcggcaaatcttcgccggcccggcacagaaacgccattctcagggcc
gaagcggtccggctttcggcgacaaagcccggcgggccgatcatcatcgccgggtcgacg
ggttcggttccggcgactgccgatctgattgccgccgtcgccaatctgcgcgaaggcgtg
atcgtccttccgggcctcgatctcgccatgcccgaagaacattggcagatggtcgcgccg
gaaccggtgccgggccagcatgccaatccggccagccggagccatccgcaatacgggctg
tcgtcactgctgaaaaggttgaggctgacacgggccgatgtcagcacccttgacagaccg
gaggccgatcttgaccggcgcgccgaaatcctgtcccggacgctcgccccgtcggaggcg
accggcgactggggtatatggaagagcgagttgcctgggggagcgctcacttcggccttc
accgacgtttcgctgatcgaagccgccaacgagcgcgaggaagcaaccgcgattgccgtt
gcgctcagactggcgctggaacggcccgggcaggacggcgagagccgggcagcgttgatc
acgccggaccgcaacctcgcccgtcgggtgatggcggagctttcccgcttcggcattctc
gccgacgattcggccggcacaccgctttcggccacgccgcaaggcagcttgctgcaattg
ctgctggaggcgtcgctgcgcccgggcgatccggtggcgatcgtctcgctgctcaaacat
ccgctggcccgcttcggcctcgaacgcaacaccctgatttttgccaccgaagcgcttgag
ctgctggcgctgcgcggcggcgtagcggaagtggatatcagcgcgctggagccgctgctc
actcatcagcttgccgaacaggctctggaccggcacgcgccgcaatggcgcaaggcgctt
tccgctgaggccgccgaggccgcattcgagctcgccggccgggtaagccgggcgacggag
cccctcgccgccgcgctggtccggcaccggccggaggatcgcggcaagacggcgagcttt
acgctttccgaatgggccgcgcgcaccggccgtgcgcttgaagcggtcgccgtcgatccg
cagggcaatcttgccgatctctggtcgaacgaggcgggggacgcacttgcctcccttctc
ggcgaagtgatcgacacggacgggcagatggaggccgacgggccgcaatggatcgacatc
atggcggcgcttgccgccggccatgcggtaaagcctcgggcgctaagccaccccaggctg
ttcattttcggcacgctggaagcccggctgcaaagcgtcgacacgctgatcctcggcggg
ctgaacgaaggctcatggcccggacagagcgccaacaatccgttcattccgcgaatgatg
aagacggagatcgggctcgaaccgccggagcggcgcatcggccagctggcgcatgatttc
gagatggcgaacggtacccgccacctgatctattccagggcgctacgccagggctcgacg
ccgacggtcgcctcgcgctggctgcagcggctgctggcgctcggcggcgaggcgttcgag
gcggaactcaaggggcgcggcgcccgcttcctgcaatgggccggtctcgtcgatcgggga
gagacccaggcgccggcgcagcggccctcgccgaaaccgctgcgggcactgcagccgcaa
tcctactccttcagcgaggtcgggcggctgcgccgcgatccctatgccatctatgcccgc
cgcattctgcggctcgatccgatcgacgcgttcaatcgcgatcccggagcagctgaacgc
ggtacgctctatcacaagatcatcgaccggttcatccgcgcggcccatgtggccggcacg
ccggaggcggcagcggcgatggagcttatcctgaccgagcttttcgacatggaaaagctg
ccgccgcatatcgatgccgtctggcggccgcgctttcgggaagtcgctcgcgccttcctc
gaatgggaggccggacgacggccagccatccgcaggacgctgacggaagtgcgcggcggc
gtcgagctggagccgatcaatatccggctcaatggcgtcgcggaccggatcgacatcacc
gggccgaacgccgccgatatcatcgactacaagaccggctacaacccctcgccggcccag
gcccgcgcgcttctcgatccgcagctcgcgctggaagccgccgccttgcgcgccggtgcc
tttcgtgatgcgggcagcctgacgccgcaggatctgctctatgtccgcctgcgtcccgga
aaccggttccaggtcgatatggtcaacaatgaaaatgccgcccgcagcgacaaggcgaaa
tcggcgatcgaccttgccgaggaatcagtcgaccagctggtcaagttcgtcagcctgctg
caatccggcgaaaaaggctttacctcgcggctcattccggcgcaacaatttgatttcggc
ggcgactacgatcatctcgcccgcgtctccgaatggtcgacggcggagaatgaggaaggc
ggcggcgatgagtga
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