Rhizobium phaseoli: AMC79_CH00124
Help
Entry
AMC79_CH00124 CDS
T04590
Symbol
speF
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha00330
Arginine and proline metabolism
rpha00480
Glutathione metabolism
rpha01100
Metabolic pathways
rpha01110
Biosynthesis of secondary metabolites
rpha04148
Efferocytosis
Module
rpha_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AMC79_CH00124 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AMC79_CH00124 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AMC79_CH00124 (speF)
Enzymes [BR:
rpha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AMC79_CH00124 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF7079
Motif
Other DBs
NCBI-ProteinID:
ANL95977
LinkDB
All DBs
Position
complement(132148..134511)
Genome browser
AA seq
787 aa
AA seq
DB search
MIPRDVKSPTVAIPFHKMLKIVAIIDRDNSQAQELVSQIIDQGFQVELRGDYSADVSEDA
DVGAYIGSVEGGRLSAARSFLRSVRDNGFRTPIWAMADTLTIKDMDVVEMAGEVDGFVYL
GQQTPTFYAKQIVSSAVNYGKSLLPPFFGGMMAYDGEANIAFDCPGHQGGQFYRKSPAGQ
LFFKYFGESIFRNDLCNADVDLGDLLIHEGPAVEAQKQAARIFGADRTYFILNGTSTSNK
VVANAVLHSGDLVLFDRNNHKSLHQGALVQAGAIPIYLPTARNSFGMIGAVDWAAWDESW
LRRKIEEHPLVADKSRATADRPFRLACIQLATYDGTIYNVGQVMEKIGHLCDYVLWDEAW
IGYNAFHPLFEGHSPMRLKDLRADMPGLFSTQSVHKQGAGFSQASQIHKRDEHISGQRRF
VEHKRFNESLLMHVSTSPFYPLFASLDVNAKVHEGKAGEMLWDRCIELGIEVRKKLRGFV
QHYESNAASSEEQWFFDPFVPDKVTVSGSRHTNDLEGVRWEDIPTDVLKREQQCWQFDPQ
ARWHGYAGYAPGYTMVDPNKLAILTPGIDRKTGGYRDFGIPATVVANYLREQRVVAEKCD
LNSLLFLLTPAEDESKLNTLVAKLVKFKNLWDRDAPLQEVLPTVYAANRERYAGYTVRQV
CHEMHSFYRDAGVKELQRLCFRSESFPEPAIAPKQAYEALVANNVDYVPLTQAAGRISAT
LALIYPPGIGVIVPGERWDDRARPMRDYFLAFEESFNRFPGFNYEVQGVFQERIEGRIQF
HTYVVRA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcgtgatgtgaaatctccgacggtcgccatacccttccacaagatgctgaag
atcgtggcgatcatcgaccgcgacaactctcaggctcaggaactggtgtcacagatcatc
gaccagggtttccaggttgaactgcgtggcgactattccgccgatgtctcagaggatgcc
gatgtcggcgcctatatcggctcggtcgagggcggccggctgtcggcggctcgcagcttc
cttcgctcggtcagggataacggctttcgtacaccgatctgggcgatggccgatacgctg
accatcaaggatatggacgtcgtcgaaatggccggcgaggttgacggcttcgtttacctc
ggccagcagacgccgaccttctacgccaagcagatcgtctccagcgcggtcaattacggc
aagtcactgctaccgccgtttttcggcggcatgatggcctatgacggcgaggcgaatatc
gccttcgattgccccgggcatcagggcggccagttctatcggaagtcgccggccggccag
ctgttcttcaaatatttcggcgagagcattttccgcaacgacctctgcaacgcggatgtc
gacctcggcgacctgctgatccacgaaggtccagccgtcgaggcccagaaacaggcggcg
cgcatcttcggtgcggaccgcacctatttcatcctcaacggaacaagcacctccaacaag
gtggttgccaatgcggtgctgcacagcggcgatctcgtgctcttcgaccgcaacaaccat
aaatccctgcatcagggcgctctcgttcaggccggcgccatcccgatctatctgccgacc
gcccgcaattctttcggcatgatcggcgcggtggactgggcggcgtgggatgaaagctgg
ctgcggcgaaagatcgaggaacatccgctcgtcgccgacaagagccgtgcaacggcagat
cggcccttccgtctcgcctgcatccaactcgcgacctatgacggcacgatctataatgtc
ggccaggtcatggaaaagatcggccatctctgcgactacgtcctctgggacgaggcctgg
atcggctacaatgccttccacccgctcttcgaaggccacagcccgatgcgtctcaaggac
ctgcgggccgatatgccgggcctgttttcaacccagtcggtccacaagcagggcgccggc
ttttcccaggcgtcgcagatccacaagcgggacgaacatatcagcggccagcgccggttc
gtcgaacacaaacgcttcaatgaatcgctgctgatgcatgtctcgacctctcccttctat
ccgctgttcgcctcgctcgatgtcaatgccaaagtgcatgagggcaaggccggcgagatg
ctctgggaccgctgcatcgaactcgggatcgaggtgcgcaagaagttgcgcggtttcgtt
cagcactacgagtccaatgccgcaagctccgaagaacagtggttcttcgatcccttcgtg
cctgacaaggtcaccgtttcaggctccagacataccaacgacctcgaaggcgtgcggtgg
gaggatatcccgacggatgtgctcaaacgcgagcagcaatgctggcagttcgatccgcag
gcaaggtggcacggctatgccgggtatgcaccaggttacaccatggtcgaccccaacaag
ctggcaatactgacacccggcatcgaccggaagaccggcggctatcgcgacttcggcatc
ccggcgactgtcgtcgccaactatctgcgcgagcagcgggtggtggcggaaaaatgcgac
ttgaacagtctcctgttcctgctgaccccggccgaggatgagagcaagctgaacacgctc
gtcgccaagctggtcaaattcaaaaatctctgggaccgagacgcgccgctgcaggaagtg
ctgccgaccgtctatgcggccaatcgcgagcgctatgccggttatacggtccgtcaggtc
tgccatgagatgcactccttctatcgcgatgctggcgtgaaggaattgcagcgcctctgc
ttccgctccgagagcttcccggaaccggccattgctcccaagcaggcctacgaagcgctg
gtcgccaacaatgtcgactacgtgccgctgacccaggctgccggccgtatttcggcaacg
ctggcgctgatctatccgccggggatcggcgtgatcgttcccggggagcgctgggatgat
cgggcgcgcccgatgcgggactatttcctcgccttcgaggagtcgttcaaccggtttccg
gggttcaattacgaagtccagggcgtgttccaggaaaggatcgaggggcggatccaattc
cacacatatgtcgtgcgcgcgtag
DBGET
integrated database retrieval system