Rhizobium phaseoli: AMC79_CH00195
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Entry
AMC79_CH00195 CDS
T04590
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03030
DNA replication
rpha03410
Base excision repair
rpha03420
Nucleotide excision repair
rpha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMC79_CH00195 (polA)
03410 Base excision repair
AMC79_CH00195 (polA)
03420 Nucleotide excision repair
AMC79_CH00195 (polA)
03440 Homologous recombination
AMC79_CH00195 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpha03032
]
AMC79_CH00195 (polA)
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH00195 (polA)
Enzymes [BR:
rpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMC79_CH00195 (polA)
DNA replication proteins [BR:
rpha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMC79_CH00195 (polA)
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMC79_CH00195 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMC79_CH00195 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DUF4350
PUA_4
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ANL96044
LinkDB
All DBs
Position
206370..209441
Genome browser
AA seq
1023 aa
AA seq
DB search
MKLTPLSLGAPNFIWTSFRARAIHARMKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLP
VGAVSGFCNMLWKLLRDARNTDVGVTPTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEEL
VPQFGLIREATRAFNLPCIETEGFEADDIIATYARQAEAVGADVTIVSSDKDLMQLVTPN
VHMYDSMKDKQIGIPDVIEKWGVPPEKMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEY
GDLDTLLERATEIKQVKRRETILANIEMARLSRDLVRLRTDVPLDLDLDALVLEPQNGPK
LIGFLKTMEFTTLTRRVAEVCDCDASAIEPAVVRIEWGDAAHGPDLDAAEPAPVAGGIPE
VSGQSVPVPPRAKAGVEGAFSPADLAKARAEAFAALPFDHSAYVTIRDLATLDRWIADAR
DTGLVAFDTETTSLDAMQAELVGFSMAIADNVADPSGTKIRAAYVPLAHKNGVGDLLGGG
LAENQVPMRDALLRLKALLEDESVLKVAQNLKYDYLLLKRFGIETKSFDDTMLISYVLDA
GTGAHGMDPLSEKFLGHTPIPYKDVAGSGRANVTFDLVDIDRATHYAAEDADVTLRLWLV
LKPRLAAAGLTSVYERLERPLLPVLARMEARGITVDRQILSRLSGELAQGAARLEDEIYT
LAGERFNIGSPKQLGDILFGKMGLAGGSKTKTGQWSTSASVLEDLAAAGFELPRKIVDWR
QLTKLKSTYTDALPGYVHPETKRVHTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRT
AFISTPGHKLISADYSQIELRVLAHVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPG
EVRRRAKAINFGIIYGISAFGLANQLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARD
KGYVETIFGRRINYPEIRSSNPSVRAFNERAAINAPIQGSAADVIRRAMIKIEPALAEAG
LAERVRMLLQVHDELIFEVEDEDVDKAMPIIVSVMENATMPALEMRVPLKVDARAATNWD
EAH
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctgacgccattatctctcggcgcgccgaactttatatggacctcgttccgagcc
cgcgctatccatgcacgcatgaaaaaaggcgatcacctcttcctagtcgacggttccgga
ttcatctttcgggcgtttcatgcattgccgccgctgacgcgcaagacggatggtttgccg
gtcggcgccgtttccggtttttgcaacatgctgtggaaactcttgagggacgcgcgcaat
accgatgtcggggtgacgccgacccatcttgccgtcatcttcgattattccgccaagaca
ttccgcaaggatctctacgacgcttacaaggcgaatcgttcggccccgcccgaagagctc
gtcccgcaattcgggctcatccgcgaggcaacccgcgccttcaatctgccctgcatcgaa
acggaaggcttcgaagccgacgacatcatcgccacctatgcccgccaggccgaagccgtg
ggtgccgatgtcaccatcgtctcctccgacaaggatctgatgcagctcgtcactccgaac
gtccacatgtacgacagcatgaaggacaagcagatcggcattcccgacgtgatcgagaaa
tggggcgtgccgccggaaaagatgatcgacctgcaggctatgaccggcgactcggtcgac
aacgtgcccggcattcccggtatcggcccgaaaaccgctgcccagctccttgaggaatac
ggcgatctcgacacgctgctcgaacgcgccaccgagatcaagcaggtcaagcgccgcgag
acgatccttgccaacatcgagatggcgaggctttcccgcgatctcgtgcggctgcgcacc
gacgtgccgctcgatctcgatctcgacgcgctggtgctggagccgcagaacggtccgaag
ctgatcggctttctcaagacgatggagttcacgacgctgacgcggcgggtcgcggaagtc
tgcgattgcgatgcgagcgccatcgaaccggcggtcgtccgcatcgaatggggtgacgcc
gcccatggtcccgatctcgatgcggccgagccggcgcccgtcgccggcggcattcccgag
gtttcagggcaatccgtgcctgtgccgccgcgtgcgaaggctggcgtcgaaggcgccttt
tcgcctgccgatcttgccaaggcgcgggccgaggcctttgcggcgctgcccttcgatcat
tccgcttatgtgacgatccgtgatctcgccacgctcgaccgatggatcgccgatgcgcgc
gacaccggtctcgtggctttcgataccgagaccacctcgcttgacgccatgcaggccgag
ctcgtcggcttctcgatggcgatcgccgacaacgtcgccgatcccagcggcacgaagatc
cgcgccgcctatgtgccgcttgctcacaagaacggcgtcggcgatctgctcggcggcggc
cttgccgaaaatcaggtccctatgcgtgatgcgctgctgcggctgaaggcactactggag
gatgaatcggttctgaaggtcgcccagaatctgaaatacgactatctgctgttgaaacgc
tttggcatcgagaccaagagcttcgacgacacgatgctgatctcctatgtgctcgacgcc
ggcaccggcgcccatggcatggacccgctgtcggaaaaattcctcggccatacgccgatc
ccctataaggacgtggccggcagcggcagggcgaacgttaccttcgatctggtcgatatc
gatcgcgccacccattatgccgccgaagatgccgatgtgacgctgcgcctctggctggtg
ctgaagccgcggctggcggcagccgggctgaccagcgtttatgaacggctggagcggccg
ctgctgccggtgctggcgcggatggaagcgcggggcatcaccgtcgaccggcagatcctg
tcgcgcctgtccggcgaactggctcaaggtgcggcgcgcctggaggacgagatctacacg
ctggccggcgagcgtttcaatatcggctcgccaaagcagctcggtgatatcctgttcggc
aagatgggtcttgccggcggcagcaagacgaagaccgggcaatggtcgacctccgcctcg
gtgctcgaggatctcgccgccgccgggttcgaactgccgcgcaaaatcgtcgactggcgc
cagctcaccaagttgaaatcgacctacacggatgcgcttcccggctatgtgcatccggag
accaagcgggttcacacttcctactcgctggcctcgaccacgacaggtcgcctgtcttcc
tcggaaccgaatctgcagaatattccggtacgcaccgccgaaggccgcaagatccgcacc
gccttcatatcgacaccgggccacaagctgatttccgccgattacagccagatcgaactg
cgcgtgcttgcccatgtggccgaaatcccgcagctgaccaaggccttcgaggatggcgtc
gacatccatgcgatgaccgcctcggaaatgttcggcgtgccggtcgagggcatgccgggc
gaggtgcgccgccgcgccaaggcgatcaatttcggcatcatctacggcatttcggccttc
ggccttgccaatcagctgtcgatcgagcggtcggaagctggcgactatatcaagaaatat
ttcgagcgttttccaggcatccgcgactatatggagagccgcaaggccatggcgcgcgac
aaagggtacgtcgagacgatcttcggccggcgaatcaactatcccgaaatccgctcgtcc
aatccctccgtgcgcgccttcaacgagcgggcggcgatcaacgcgccgatccagggctcg
gccgccgacgtcatccgacgggcgatgatcaagatcgagccggcgctggctgaagccggc
ctcgctgagcgcgtccgcatgctgttgcaggtgcatgacgaattgatcttcgaagtcgag
gatgaggatgtcgacaaggcgatgccgatcatcgtctcggtcatggaaaacgccaccatg
ccagccctcgaaatgcgtgtgccgctgaaggtggatgcgcgcgctgccaccaattgggac
gaggcgcattga
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