Rhizobium phaseoli: AMC79_CH00417
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Entry
AMC79_CH00417 CDS
T04590
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpha03016
]
AMC79_CH00417 (miaB)
Enzymes [BR:
rpha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AMC79_CH00417 (miaB)
Transfer RNA biogenesis [BR:
rpha03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AMC79_CH00417 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ANL96262
LinkDB
All DBs
Position
complement(423003..424412)
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AA seq
469 aa
AA seq
DB search
MTQDSALLQAPEPMLRDGSNSRKVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDMEEAD
LVLLNTCHIREKAAEKVYSALGRLREMKKKKAADGREMMIGVTGCVAQAEGEEILRRAPA
VDVVIGPQTYHRLPEALRRAQQGQRVVDTEYAIEDKFEHLPIAESRKIRARGVTAFLTVQ
EGCDKFCTFCVVPYTRGSEVSRAVSQIVEEAEKLVEGGVREITLLGQNVNAWHGAGPRGE
AWSLGDLLYRLAEIPGLARLRYTTSHPRDMDDRLIEAHRDLRALMPYLHLPVQSGSDRIL
KAMNRRHTAAEYLSLIDRIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVRYAQAF
SFKYSTRPGTPGAELKDQVPEEIKAERLERLQALLLKQQQEFAESCIGKEIDLLLEKPGR
MPGQLIGRSPWLQSVNVDAKASQIGDIIKVRITGTGTNSLFAERAEAAV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggacagcgcccttctccaggccccggagccgatgctccgtgacggctccaac
agccgcaaggttttcatcaagacctatggctgccagatgaacgtctatgattccacgcgc
atgagcgatgcgctcgcccgcgacggctacgagccgacggaagacatggaagaggccgac
ctcgtgcttctcaacacctgccatatccgcgaaaaggcggccgagaaggtctattccgcg
ctcggccggctgcgcgagatgaagaagaagaaggcggcggacggccgggagatgatgatc
ggcgtcaccggttgcgtcgcccaggccgaaggcgaggagatcctgcgccgggcgcccgcc
gtcgacgtcgtcatcggcccgcagacctatcatcgcctgccggaagcgctgcgccgggcc
caacagggccagcgcgtcgtcgacaccgaatatgcgatcgaggacaagttcgagcatctg
ccgattgccgagagccggaagatccgcgcccgcggcgtcaccgccttcctgacggtgcag
gagggctgcgacaagttctgcaccttctgcgtcgtgccctatacacgcggctcggaagtg
tcgcgagcggtttcccagatcgtcgaggaggccgaaaagctggtcgaggggggcgtgcgc
gagatcaccctgctcgggcagaacgtcaatgcctggcacggcgccggaccgcggggcgag
gcatggagcctcggcgacctgctctaccgccttgccgagatccccggccttgcccgactg
cgctacaccaccagccatccgcgcgacatggacgaccggctaatcgaggcgcatcgcgac
ctgagggcgctgatgccctatctgcacctgccggtgcaatcgggctcggaccgcatcctg
aaagcgatgaaccggcgccatacggccgccgaatatctttcgctgatcgaccgcatccgc
accgtgcggcccgacatcgcgctgtcgggcgatttcatcaccggctttccgggggagaca
gacgcggattttgaggatacactgaggcttgtggaggaggtgcgctacgcgcaggccttc
tcgttcaaatactcgacacggccgggcacccccggcgcggaactgaaggaccaggtgccg
gaagaaatcaaggcagaacggctggaacgcctgcaggcgcttcttttgaagcagcagcag
gaatttgccgaatcctgcatcggcaaggagatcgatctgttgctcgaaaagcccggccgc
atgcccggccagctaatcgggcgttctccctggcttcaatccgtgaatgttgatgcaaaa
gcatcgcaaatcggtgacattattaaagtgcgaatcaccggaaccggaacgaacagcctg
tttgccgaacgcgcagaggctgcggtctaa
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