Rhizobium phaseoli: AMC79_CH00517
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Entry
AMC79_CH00517 CDS
T04590
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha00061
Fatty acid biosynthesis
rpha00071
Fatty acid degradation
rpha01100
Metabolic pathways
rpha01212
Fatty acid metabolism
rpha02024
Quorum sensing
rpha04146
Peroxisome
Module
rpha_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AMC79_CH00517 (fadD)
00071 Fatty acid degradation
AMC79_CH00517 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AMC79_CH00517 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMC79_CH00517 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpha01004
]
AMC79_CH00517 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpha04147
]
AMC79_CH00517 (fadD)
Enzymes [BR:
rpha01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AMC79_CH00517 (fadD)
Lipid biosynthesis proteins [BR:
rpha01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AMC79_CH00517 (fadD)
Exosome [BR:
rpha04147
]
Exosomal proteins
Exosomal proteins of breast milk
AMC79_CH00517 (fadD)
Exosomal proteins of breast cancer cells
AMC79_CH00517 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ANL96360
LinkDB
All DBs
Position
complement(523952..525652)
Genome browser
AA seq
566 aa
AA seq
DB search
MSSISVHPNGAKADKPWLATYPEMVPAELPPLEHVSLAELLEKSCARYADRTVFSSMGKA
MSYRELEDQTRKVAAWLQSIGLDKGDRVAVMMPNVLQNPVATYAILRAGFVVVNVNPLYT
PRELEHQLRDSGAKAIFVLENFARTVEQVLNKTDLRHVVVTSLGEMLGPKGLIVNFVVRK
VKKLVPSWSIPQHKSFSQVLREGAKKSLQPVTLAGGDVAFLQYTGGTTGVAKGAVLTHQN
LLANKLQLSLWLRSAFERKKQPEVLNFLCALPLYHIFALTVNSLMGMSLGAHNILIANPR
DIPGLVKEFEKSDVHIFPGLNTLFNALMNNAEFAKLDFSSLIMSLGGGMAVQRPVAERWL
KMTGTAITEGYGLSETSPVATANRFDSIEFTGSIGLPLPSTELDIRDEEGRPLPLGEIGE
ICIRGPQVMAGYWQKPEETARVMTVDGYFRSGDMGFMDERGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHAGILEAAAIGVPDGHSGEAVKLFVVRKDPNLTEAEVKAHCIANLTNYK
RPRFIEFRTELPKSPVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatttccgtccatccgaacggagcaaaagccgacaagccctggcttgccacc
tatcccgaaatggttccggccgaactcccgccgctggaacatgtctctcttgccgaactc
ctggaaaagtcctgcgcccgttacgccgaccggacggtcttttccagcatgggcaaggcg
atgagctaccgcgagctggaggaccagacgcgcaaggtcgccgcctggctgcagagcatc
gggctcgacaagggcgaccgcgtcgcggtgatgatgccgaacgtcctgcagaatccggtc
gcgacctatgccatcctcagagccggcttcgtcgtcgtcaacgtcaacccgctctatacg
ccgcgtgaactcgaacaccagctgcgcgattccggcgccaaggcgattttcgtgctggag
aatttcgcccgcacggtcgagcaggtcctgaacaagaccgatctgcgccacgtcgtcgtc
acctcgctcggcgaaatgcttggccccaaggggctgatcgtcaatttcgtcgtgcgcaag
gtgaagaagctcgttccttcctggtcgatcccgcagcacaagagcttcagccaggtgctg
cgcgaaggcgcgaagaaaagccttcagccggtgactcttgccggcggcgacgtcgccttc
ctgcaatataccggcggcacaacaggcgttgccaagggtgcggtgctgacgcatcaaaac
ctgctcgccaacaagctgcagctgtcgctctggctgcgatcggccttcgagcgcaagaaa
cagccggaagtgctgaatttcctctgcgcgctgccgctctaccacatcttcgcgctgacg
gtgaattcgctgatgggcatgtcgctcggcgcccataatatcctgatcgccaatccgcgc
gacattcccgggctcgtcaaggaattcgaaaagtccgatgtgcatatcttcccgggcctc
aacacgctgttcaacgcactgatgaacaatgccgaattcgccaagctcgacttctcctcg
ctgatcatgtcgcttggcggcggcatggccgtccagcgcccggtcgccgaacgttggctg
aagatgaccggcacggcaattaccgagggttacggcctttccgagacctcgcccgtcgcc
accgccaaccgcttcgattcgatcgagttcaccggttcgatcggcctgccgctgccctcg
accgaactcgacatccgcgacgaggagggccggccgctgccgctcggcgaaatcggcgag
atctgcatccgcgggccgcaggtgatggccggctactggcagaagccggaggagacggcg
cgggtgatgaccgtcgacggctatttccgctcgggcgacatgggcttcatggacgaacgc
ggctacaccaagatcgtcgaccgcaagaaggacatgatcctggtttcgggcttcaacgtc
tatccgaacgagatcgaggaagtcgccgccatgcatgccggcattctcgaagccgcggcg
atcggcgtgccggacgggcattcgggcgaagcggtcaaactcttcgtcgtcaggaaggat
ccgaacctgacggaggcggaggtgaaggcccattgcatcgccaatctcaccaattacaag
cgcccgcgcttcatcgaattccgcaccgagctgccgaaatcccccgtcggaaagatcctg
cgcaaggacctgcgcggctaa
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