Rhizobium phaseoli: AMC79_CH01353
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Entry
AMC79_CH01353 CDS
T04590
Name
(GenBank) uracil-DNA glycosylase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMC79_CH01353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH01353
Enzymes [BR:
rpha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AMC79_CH01353
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMC79_CH01353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANL97178
LinkDB
All DBs
Position
complement(1377974..1378864)
Genome browser
AA seq
296 aa
AA seq
DB search
MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAAGE
RPSVGERQTSPRPTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLGELKTAIEAFNG
CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS
VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH
GLRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSLSLLRN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgccaacgacctttcccccgccgagcttgcagcgcttctgcatttccatgcg
gatgccggcgtggagtggctgctggaggaagaggcggtcgaccgcttcgccgagttcgag
gcgatgaaggccgcgcgccgcccggcgtcggcgcagcaggaacgccctgcggccggggag
cgccctagcgtcggagaacgtcagacatcgccgcgcccgactgccgcagcccgtccggcc
ccggtctccggcccgcagccggcgattccggacggcgaggcagtgcagcaggcgcgtttc
gtcgccgaagccgcgcgatcgctcggcgagttgaagaccgcgatcgaagccttcaacggc
tgcaatctcaaacacagcgcccgctcgaccatctttgccagcggcgatgccgaaagcggc
atcatggtgatcggctcggcgccgagcgccgaagacgaccgtgaaggcctgcccttctcg
ggcaagtccggccagttgttcgacaagatgctggcggcgatcgggctgaaccgctcgagc
gttctgctgacgcaggtcattccctggcgcccgccgggcaaccgggcggcatcggcggcc
gagatcgacatctgccggcccttcatcgaacgacagatcgcgctcgccgaaccgcaggcg
atcctgctgctcggcaatttcgcagcgcgattcttcctcggggaaaacgatacgattcac
ggcctgcggggccgctggaaagacatcgtcatcgccgatcgtgccattccggccatcgcc
agcctgcatccccaggatctgttaaccgcacccgtcaacaagcggctggcctggaacgat
cttctcgccttccaggcaaaactgaaatccctctccctgctcagaaattag
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