Rhizobium phaseoli: AMC79_CH01651
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Entry
AMC79_CH01651 CDS
T04590
Name
(GenBank) RNA-metabolising metallo-beta-lactamase hydrolase protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMC79_CH01651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpha03019
]
AMC79_CH01651
Messenger RNA biogenesis [BR:
rpha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AMC79_CH01651
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Ortholog
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Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Lactamase_B_3
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ANL97467
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Position
1676573..1678243
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AA seq
556 aa
AA seq
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MAKQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR
FLANERKNLKAIIITHAHEDHYGALADLWPGLNVPVFASAFTSGLLEAKRNFEKARIGEV
PVTPFKAGDTINVGPFSIEGVAVNHSIPEPMSLMIRTPAGNVIHTGDWKIDHEPSLGPLT
DETRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVG
RIRTVAEAAEAAGREVLLLGSSLKRVVDVAQDIGLMEGVKPFISEEEYGYIPRDKVVVIL
TGSQGEARAALAKLSRDEMRNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIIT
DTEALVHVSGHPRRNELQRMYEWTRPKIVVPVHGEATHLTAHKELAEQSGISIVPRVRNG
DILRLAPGPVEVIGEAPHGRIYKDGMLIGDFDEMGIGERKKLSYVGHVAVSIVLDARYDI
IGDPDLVSIGLPVYDDEGDEMEDTLFDAAISAIESIPRARRKDLDMLQEAVRRAIRAAAN
QSWGKKPVVTAFVTKV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaggacgaattggtattcctgcctctgggcggcgttggcgagatcggcatg
aatctcgctctctacggctacggcccgcccgagcatcgccagtggatcatggttgattgc
ggcgtcacctttcccggcccggatctgccgggcgtcgacctcgtcctgcccgacatccgc
ttccttgccaatgaacgcaagaacctcaaggcgatcatcatcacccacgcccatgaagac
cattatggcgcgctcgccgatctctggcccgggctcaacgtaccggttttcgcctcggct
tttacgtcaggtctgctcgaagccaagcgcaatttcgagaaggcgaggattggcgaagtg
ccggtgacgccgttcaaggcaggcgacacgatcaatgtcggccccttcagcatcgaaggt
gtggccgtcaaccactcgatcccagagccgatgtcgctgatgatccgcacaccggccggc
aacgtcatccacaccggcgactggaagatcgaccacgagccctcgctcggccccttgacc
gatgagacgcggttccgccagcttggcgacgagggtgtgctggcgctgatgtgcgattcc
accaatgcgctgcgcgacggtgtttcgccctccgaaaaggatgtctcggaaagcctgcgc
aagatcatcgaagatgctgaaggccgggtggcgatcaccaccttctcgtcgaatgtcggg
cgcatccgcaccgtcgccgaggccgccgaggcggccggccgcgaagtgctgctgctcggc
agctcgctgaagcgggtcgtcgacgtcgcccaggatatcggcctgatggaaggcgtgaag
cccttcatctccgaggaggaatacggctatatcccacgcgacaaggtcgtcgtcatcctg
accggcagccagggcgaggcgcgggcagcccttgccaaactctcccgcgacgaaatgcgc
aatgtggcctttgcggcgggcgatatcgtcgtcttttcctcgcgcgccattcccggcaac
gagaaggcgatccaggacatcaagaacggccttgtcgagcagggcgtgcacatcatcacc
gataccgaggcgctcgttcacgtctccggccatccgcgccgcaacgaactgcagcgcatg
tacgagtggacgcggccgaagatcgtcgtgccggtgcatggcgaggcgacgcatctgacg
gcgcacaaggagcttgccgagcaatccggcatttcgatcgtgccgcgggtgcgcaacggc
gatatcctgcggctggcgcccggtccggtcgaggtgatcggcgaagcgccgcacggtcgc
atttacaaggatggcatgctgatcggcgatttcgacgagatggggatcggcgagcgcaag
aaactctcctatgtcggccatgtcgcggtcagcatcgtgctcgacgcgcgttatgatatc
atcggcgatcccgatctcgtctcgatcggcctgcctgtttatgacgacgagggcgatgag
atggaggatacgctcttcgacgcggcgatcagcgctatcgaaagcattccgcgggcccgc
cgcaaggatctggacatgctgcaggaggccgttcgccgcgccatccgcgccgctgccaac
cagagctggggcaagaagcccgtcgttaccgccttcgtcaccaaggtctga
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