Rhizobium phaseoli: AMC79_CH01674
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Entry
AMC79_CH01674 CDS
T04590
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpha03032
]
AMC79_CH01674 (topA)
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH01674 (topA)
Enzymes [BR:
rpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMC79_CH01674 (topA)
DNA replication proteins [BR:
rpha03032
]
Prokaryotic type
DNA Topoisomerases
AMC79_CH01674 (topA)
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMC79_CH01674 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ANL97488
LinkDB
All DBs
Position
complement(1700105..1702759)
Genome browser
AA seq
884 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK
RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKSVKRVVFNAITKKAV
LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFISEEYWNLSALLKTPRGDEFEARLVSANGKRLPPRAIGNGEDAGRLKALLEGA
SYIVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFSASRTMQIAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIDAARRAILDQFGERYLPEKARFYSTKAKNAQEAHEAIRPTDFYR
SPDRLRKFLDADQIRLYELIWKRGIASQMASAEIERTTAEITADNKGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARENLSKQKINSTQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT
ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE
DGSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNYTRQLSSENGGETEGVALNEPKNL
GTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKPEDIDYEKAMALISLPRDIGK
HPETGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTVIAEKANKAPGRGARG
TPAALKTLGDHPEGGAITVRDGKYGPYVNWGKVNATLPKGKDPQAITIEEALALITEKAG
KAPVGKPAKAKAKPKAAAAEAKTTKTAAKPKATKAKTPAKAKKG
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgcctgccaaggccaagacgatcaacaagtatctgggt
tcgggatacaaagtgctcgcctccttcggccatgtgcgcgatctgcctgccaaggatggc
tcggtcctccccgatcaggatttcgaaatgctctgggaggtcgatggggcctcggccaag
cggatgaaggatattgccgacgcggtgaaatcctccgatggcctgtttttggcgaccgac
ccggatcgggaaggcgaagcgatttcctggcacgttctcgacatgctgaacaagaagcgg
gtgctgaacggcaaatccgtcaagcgcgtggtcttcaacgcgatcaccaagaaggcggtg
ctcgatgcgatggccgatccgcgcgacatcgacgtgccgctggtggacgcttatctggcg
cgccgcgcgctcgactatctcgtcggcttcaatctttcgccggtcctgtggcgcaagctg
cccggcgcgcgttcggccggacgcgtccagtcggtggcgcttcgtctggtctgcgaccgt
gaatccgagatcgagcgcttcatttcggaagaatattggaacctctcggcgcttctgaag
acgccacgcggcgacgagttcgaggcaagactggtttcggcgaacggcaaacggctgccg
ccgcgcgccatcggcaatggcgaggatgccggccgcctgaaagcattgctcgaaggcgca
agctatatcgtcgacacggtcgaggcgaagccggtcaagcgcaatccggggccgcccttt
accacctcgaccttgcagcaggccgcctcctccaatctcggtttctcggcctcgcgcacc
atgcagatcgcccagaagctctatgaaggcgtcgatatcggcggcgagacggtcggtctc
atcacctatatgcgaaccgacggcgtgcagatggcgcccgaggcgatcgatgcggcccgg
cgcgccatcctcgatcagttcggcgaacgctatctccccgaaaaggcgcgcttctattcg
accaaggcgaaaaacgcccaggaggcgcacgaggcgatccgtccgacggacttctaccgc
tcgcccgatcgtctgcgcaaattcctcgacgccgatcagatccggctctacgagctgatc
tggaagcgcggcatcgccagccagatggcgtcggccgagatcgaacgcacgacggccgaa
atcaccgccgacaacaaaggcgagaaggctggcctgcgcgccgtcggctcggtcatccgc
ttcgacggcttcatcgccgcctataccgaccagaaggaagacggcgagcagagcgacgat
ggcgacgaggatggccgcctgccggagatcaatgcgcgcgagaacctttccaagcagaag
atcaattcgacgcagcatttcaccgaaccgccgccgcgatattcggaagcctcgctgatc
aagaagatggaagaactgggcatcggccgcccctccacctatgccgcaacgctcgcgacg
ctacgcgaccgcgactatgtgacgatcgacaaacgcaagctgatcccgcaggccaagggc
cggctggtgaccgccttcctcgagagcttcttcaccaaatatgtcgaatacgacttcacg
gccgacctggaggaaaagctcgaccggatttcggccggcgaattgaactggaagcaggtg
ctgcgcgatttctggaaggatttcttcgcccagatcgaagataccaaggaattgcgcgtc
accaacgtgctcgattcgctgaacgaggcgctggcgccgctggtcttcccgaagcgcgaa
gatggcagcgaccccaggatctgccaggtctgcggcacaggcaacctgtcgctgaagctc
ggcaaatacggcgccttcgtcggctgctcgaactatccggaatgcaactacacccgtcag
ctctcctccgaaaacggcggagaaacggaaggagtcgcgctcaacgagccgaagaacctc
ggcaccgatccgacaaccggcgaagagttgacgctgcgttcgggccgcttcggcccctat
atccagcgcggcgacggcaaggaggccaaacgcgcgtcgctgccgaaaggctggaagccg
gaggacatcgattacgaaaaggcgatggcgctgatttcgttgccgcgcgatatcggcaaa
catccggaaaccggcaagatgatttcctcgggcatcggccgttacggtccgttcctcctg
catgacggttcctatgccaatctggaaaccgtcgaggacgtattctcggtcggcctcaac
cgcgccgtgaccgtcatcgccgaaaaggcgaacaaagcgccgggccgcggcgcgcgcggc
acgccggcggcgctgaagacgctcggcgatcatcccgaaggcggcgccatcaccgttcgt
gacggcaaatacggcccctatgtcaactggggcaaggtcaacgcgaccctgccgaagggc
aaggatccgcaggcgatcaccatcgaggaagcgctggcgctgatcactgagaaggccggc
aaggcgcccgtgggaaagccggccaaggcgaaagccaaaccgaaggcagctgcggctgaa
gcgaagaccaccaagacggccgcgaagccgaaggcaacgaaggcaaaaacgccggcgaaa
gcgaaaaagggctga
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