Rhizobium phaseoli: AMC79_CH01912
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Entry
AMC79_CH01912 CDS
T04590
Name
(GenBank) deoxyribodipyrimidine photo-lyase protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH01912
Enzymes [BR:
rpha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AMC79_CH01912
DNA repair and recombination proteins [BR:
rpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AMC79_CH01912
Prokaryotic type
AMC79_CH01912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
ANL97713
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All DBs
Position
complement(1937609..1939057)
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AA seq
482 aa
AA seq
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MAKDAAKPVILWFRKDLRLGDNKALNAAHFSGRPIICLYIREPEAAGTGPLGAAQAWWLH
HSLEALDGSLRKRRGGLLLASGEALEVLRSLIRQSDADAVFWNRRYDPPGISIDARIEHE
LEKQAIEVKSFGGQLLHEPSQLMTGSGTPYRVYTPFWRALESSIEPEPLDIPSKLQLASK
LPGSEKLESWKLLSTQPDWASNFADLWTPGEEGAQEKLRTFIEDRLDGYKENRDYPAKPA
TSMLSPHLALGEISPASIWDAMRGLSKHVPAADIVHFRKEIAWREFSYHLLAHFPRLATA
NWDDRFDGFEWGSAEEDFKAWSRGMTGYPIVDAGMRQLWRYGWMHNRVRMIAASFLIKDL
MVDWRHGEAWFRDTLVDADPANNAASWQWVAGSGADASPFFRIFNPVLQGEKFDPDGDFV
RAHVPELRKLDAKYIHRPFEAPKSVLDAADVILGETYPEPVVDHAGARKRALAAYNTIRG
AA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaggacgcagcaaaacctgtcatcctctggtttcgcaaagatttgcgccttggt
gacaacaaggcgctcaacgccgcccatttttcggggcggccgatcatttgtctctacata
agagagccggaggctgcaggcaccggtcctttaggggcggcgcaggcctggtggctgcac
cattcgctggaagcgctggacggctcgctgcgcaagcggcgcggagggctcttgcttgcc
agcggcgaagcgcttgaagtgctccgctccctgatcaggcaaagcgacgccgatgccgtc
ttctggaaccggcgctatgatccgccgggcatctccatcgacgcccgcatcgagcacgaa
ctggaaaagcaggcgatcgaagtgaaaagcttcggcggccaactgctgcacgaaccctcg
cagctgatgaccggcagcggcacaccctatcgcgtctatacgccgttctggcgcgcgctc
gagagctccatcgaacccgagccgctggacattccgtcgaaattacagctggcatcgaag
cttcccggatcggaaaagttggagagctggaagttgctgtcgacgcagccggactgggcg
agcaatttcgcagatctctggacgcccggcgaggaaggcgctcaggaaaagcttcgcact
ttcattgaggataggctcgacggctacaaggaaaaccgtgactatccggcaaaaccggca
acatcgatgctgtcgccgcatctggcgctcggcgagatctcccctgccagcatctgggat
gcgatgcgcggcttgtcgaaacacgtgccggccgccgacatcgtgcattttcgcaaggaa
atcgcctggcgcgaattctcctatcacctgctcgcccacttcccgcgccttgcgacggcc
aactgggacgaccgtttcgacggcttcgaatggggtagcgccgaggaggatttcaaagcg
tggtcccgcggcatgaccggctatccgatcgtggatgccggcatgcgccagctctggcgt
tacggttggatgcacaatcgcgtgcggatgatcgccgcctctttcctcataaaggacctc
atggtcgactggcgccacggcgaggcctggttccgggatacgttggtcgatgccgacccg
gccaataacgcggcaagctggcaatgggtggcggggtcgggcgcggatgcctcgccgttc
ttccgcatcttcaatcctgtgctgcagggcgaaaaattcgatcccgacggcgactttgtc
agggctcatgtgccggagcttcggaagctcgacgcaaaatatatccaccggccgttcgag
gcgccgaagagcgtgctcgacgcggctgacgtcatccttggcgagacttatccggaaccc
gtcgtcgatcacgccggagcccgcaagcgggcgctcgctgcctacaacaccataaggggc
gcggcatga
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