Rhizobium phaseoli: AMC79_CH02981
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Entry
AMC79_CH02981 CDS
T04590
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03420
Nucleotide excision repair
rpha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMC79_CH02981 (uvrD)
03430 Mismatch repair
AMC79_CH02981 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH02981 (uvrD)
Enzymes [BR:
rpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMC79_CH02981 (uvrD)
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMC79_CH02981 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AMC79_CH02981 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF4420
Motif
Other DBs
NCBI-ProteinID:
ANL98755
LinkDB
All DBs
Position
3012870..3015368
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AA seq
832 aa
AA seq
DB search
MSNSFDDIPFFDEEPGEMARKPQPPAAPPGAYAPAGRAPAATGGIAARAMAARDGGKRPD
YLAGLNPEQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNK
AAREMKERIALLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLSSDFTILDTDDVVRLIK
QLIQAEGLDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQARLS
TLNACDFGDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRAKG
EPQNVCCVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIA
HNEGRLGKTLFTDRADPDDVKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRA
SFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQPADDLAFERIINTPKR
GLGDTTVRALHDYARARDIPMLAAAADMIETDELKPKARKALFDVIQSFRRWQELLENTP
HTELAEQILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAE
TNENLDAVSIMTLHSAKGLEFETVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGIT
RAKRRCHIWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFD
KAEPFANSYSTPGWKRAQANKTDATRDNWGTRSGHAVERIGYGESGPKGRTIDGELVAKS
TSSEPSRFTLGDRVFHMKFGNGNITGIEGNKLTIDFDRAGQKRVLDGFVERV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagttttgacgatattcccttcttcgacgaagagccgggtgagatggcgcgc
aagccgcagccgcctgccgcacccccgggggcctacgcccccgccggaagggcgcccgcc
gcaaccggcgggatcgccgcccgcgccatggcggcgcgcgacggcggcaagcggccggat
tacctcgccggcctcaatcccgaacagacggaagccgtggaaaccctggaaggtccggtt
ctcgtccttgccggcgccggcaccggcaagacacgggtattgacgacccggatcgcccac
atcctcaatacaggccgcgccttcccctcgcagattctcgccgtcaccttcaccaacaag
gccgcacgcgagatgaaggagcgcatcgcgctcctcgtcggcggcgctgtcgaaggcatg
ccctggctcggcaccttccattcgatcggcgtcaagcttctgcgccgccatgccgagctc
gtcggcctcagctccgacttcaccattctcgacaccgacgacgtcgtccgcctgatcaag
cagctgatccaggccgaaggcctcgacgacaaacgctggccggccaagcagttcgccggc
atgatcgacacctggaagaacaagggcctcggcccggccgatattcccgaaggcgacgcc
cgcgcctttgccaatggccgcggccgcgatctctacttcgcctatcaggcgcgtctgtcg
acgctcaacgcctgtgatttcggcgatctgttgatgcatccaattgcgatcttccgcaag
aatccggatctcctcaaggaatatcacggccgcttccgttatatcctcgtcgacgagtat
caggacaccaacaccgcccagtatatgtggctgcggctgcttgcccagcgcgccaagggc
gagccgcagaacgtctgctgcgtcggcgacgacgaccagtcgatctacggctggcgcggc
gccgaggtcgacaatatcctgcgcttcgagaaggatttccctggcgccaaggtgatcaaa
ctcgaacgcaattaccgctcgaccgaacatatcctcggtgccgccgcccatctgatcgcc
cacaatgaaggccgcctgggcaagacgctgttcaccgaccgcgccgatccggatgatgtc
aaggtgcaggtccacgcctcctgggattcggaggaggaagcccgcgccatcggcgaggag
atcgagcagctccagcggggcaagcacctgctgaacgacatggcgatccttgtgcgcgcc
tccttccagatgcgcgagttcgaagaccgcttcgtcaccctcgggctcaactatcgcgtc
atcggcggcccgcgcttctacgagcgcctcgaaatccgcgatgccatggcctatttccgc
ctggtcgcgcagccggccgacgaccttgccttcgagcgcatcatcaacacgccgaagcgc
ggcctcggcgacacgacggtgcgcgccctgcacgactatgcgcgtgcccgcgatatcccg
atgctggcggccgctgccgacatgatcgagacggacgagctgaagccgaaggcgcgcaaa
gccctcttcgacgtgattcaatctttccgccgatggcaggaactgcttgaaaacacaccg
cataccgaacttgccgagcagatcctcgaggagtccggctataccgacatgtggaagaac
gacaagagcgccgaagcgccgggccgcctcgaaaatttgaaggaactgatccgctcgatg
gaaagcttcgaatcgatgcgcggtttcctcgagcacgtctccctcgtcatggacgcagag
accaacgagaacctcgacgccgtctcgatcatgacgctgcattcggccaagggcctggaa
ttcgagactgtgttcctgccgggctgggaagaaggcctgttcccccaccagcgctcgctg
gatgaaagcggccgggccggcctggaggaggaacggcggctcgcctatgtcggcatcacc
cgcgccaagcgccgctgccatatctggttcgtctcgaaccgccgcatccacggcctctgg
caatcgacactgccctcgcgtttcctcgacgagctgccggaaacccatgtcgaggttgcc
gagatggagcagagctacggcggttacggccgcggcggctacggccagtcacgcttcgac
aaggccgaaccctttgccaactcctattccacgcccggctggaaacgcgcccaggccaac
aagaccgacgccacgcgcgacaactggggcacccgctccggccacgccgtcgaacgcatc
ggctatggcgaaagcggcccgaagggacgcacgatcgacggcgagctggtcgcaaaatcg
acctcgtcggagccgtcgcgcttcaccctcggcgatcgggtattccacatgaaattcggc
aatggcaacattaccggcatcgaaggcaacaagctgacgatcgacttcgaccgtgcgggg
cagaagcgggtgctggacggtttcgtcgagcgcgtctga
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