Rhizobium phaseoli: AMC79_CH03012
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Entry
AMC79_CH03012 CDS
T04590
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha00470
D-Amino acid metabolism
rpha00550
Peptidoglycan biosynthesis
rpha01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMC79_CH03012 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMC79_CH03012 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpha01011
]
AMC79_CH03012 (murD)
Enzymes [BR:
rpha01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AMC79_CH03012 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpha01011
]
Precursor biosynthesis
Amino acid ligase
AMC79_CH03012 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
2-Hacid_dh_C
MurD-like_N
NAD_binding_2
TrkA_N
KARI_N
NAD_Gly3P_dh_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
ANL98785
LinkDB
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Position
complement(3047654..3049066)
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AA seq
470 aa
AA seq
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MIPVTTLKDRKVALFGLGGSGFATARALNLGGARVTAWDDNPDSVAKAAAEGIHTEDLHT
IDWSQQSLFVLSPGVPLTHPKPHWTVDLAHAAGVDIVGDVELFVRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKSAGYDTQLGGNIGTAVLTLDPPKAERYYVVECSSYQIDLAPTL
NPSAGILLNLTPDHLDRHGTMQHYADVKERLVAGSDVAVVGIDDSHSALIADRIQRAGVK
VVRISRRNVVADGIYAEGTRLVQAAGGAMLPFADLDGIQTLCGSHNAQNAAAAIAACLAV
GVSADDIRAGLASFPGLKHRMQPVGRRGRVVFVNDSKATNADAAAPALSSYDRIYWIAGG
LPKSGGITTLAPYFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLERAVAHAAADADRD
EAAASAVMLSPACASFDQYKNFEVRGDAFVSHVAALDGMTMLIGPVAGEK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaccacgctgaaagacaggaaggtcgcgctcttcgggctcggcggctcc
ggctttgccaccgcgcgggcgctgaacctgggcggcgcccgtgtgaccgcctgggacgac
aaccctgacagcgtcgcgaaggccgcggcagaaggcatccacaccgaggatctgcacacg
atcgactggagccagcaatcgcttttcgtgctttcgcccggcgtgccgctcacccatccg
aaaccgcactggacggtcgatctggcgcacgccgccggcgtcgatatcgtcggcgacgtc
gagctcttcgtgcgcgagcgccgcgcccacgcgcctgattgccccttcatcgccataaca
ggcacgaacggcaagtcgacgacgacggcgctgatcgcccatatcctgaaatcagcaggc
tacgacacgcagctcggcggcaatatcggcacggccgtgctgacgctcgatccgccgaag
gcagaacgttattacgtcgtcgaatgctcctcctaccagatcgacctggcgccgacgctg
aacccgtcggccggcattctgctcaacctgacgcccgatcacctcgaccgtcacggcacc
atgcagcattatgccgacgtcaaggagcggctggtcgccggcagcgatgtcgcggtcgtc
ggcattgacgacagccattcggcgctgatcgccgaccgcatccagcgagccggcgtcaag
gtggtccgcatctcgcgtcgcaacgtggtggccgatggcatctatgccgagggcacgaga
ctcgttcaggccgccggcggcgccatgctgcctttcgccgatctcgatggcattcagacg
ctgtgcggcagccacaatgcacagaatgccgcggctgccattgccgcctgccttgcggtc
ggtgtgtccgccgacgacatccgcgccgggctcgcctcgtttcccggtctcaaacatcgc
atgcagccggtcggccgacgcggccgtgtcgtcttcgtcaacgattccaaggccaccaat
gccgatgccgcagcacccgcgctttcgagctacgaccgtatctactggattgccggtggc
ctgccgaaatctggcggcatcacgacgcttgccccttattttccgcgtatcgccaaggcc
tatctgatcggcgaggcggcggcggaattcgcggcgaccctaggcgaggccgtgccctac
gaaatttccggcacgctggagcgcgccgtcgcgcatgccgcagccgacgcggatcgcgac
gaggcggctgcttcggcggtgatgttatccccggcttgcgcaagcttcgaccagtataag
aacttcgaagtcaggggcgatgccttcgtcagccacgtggcggcacttgacggaatgacg
atgctgatcggtcctgtagcaggagagaaatga
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