Rhizobium phaseoli: AMC79_CH03406
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Entry
AMC79_CH03406 CDS
T04590
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMC79_CH03406 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH03406 (ung)
Enzymes [BR:
rpha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AMC79_CH03406 (ung)
DNA repair and recombination proteins [BR:
rpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMC79_CH03406 (ung)
Prokaryotic type
AMC79_CH03406 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANL99166
LinkDB
All DBs
Position
complement(3462887..3463588)
Genome browser
AA seq
233 aa
AA seq
DB search
MSDTSVSLEESWKSALEGEFSSPYMQQLKSFLVAQKQVGKRIFPKGSEYFRALDLTPIAN
VKAVILGQDPYHGLGQAHGLCFSVRPGVRIPPSLVNIYKEMEADLGIVPARHGFLEHWAR
QGVLLLNSVLTVEEGQAAAHQGKGWERFTDAVIRKVNDECESVVFMLWGSYAQRKAAFVD
TSRHMVLKAPHPSPLSAHNGFFGCKHFSKANAFLQSRGRAPIDWQLPVDPHGS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacatccgtcagtctcgaggagagctggaagtccgccctcgagggggagttc
tcaagtccctacatgcagcagctcaaatccttcctggtcgcgcagaagcaggtcggaaaa
cggatatttcccaaaggcagcgaatatttccgcgctcttgacctgacaccgatcgccaac
gtcaaggccgtcatcctcggccaagatccctatcacgggctagggcaggcgcatggatta
tgtttcagcgtccggcccggcgtgcgcataccgccctcgctcgtcaatatctacaaggag
atggaggcggatcttggtatagtgccggcgcgtcacggttttctcgagcattgggcgcgg
cagggcgtgctgctgctgaacagcgtgctgacagtcgaggaagggcaggcggcggcccat
cagggcaagggttgggaacgcttcaccgatgccgtcattcgcaaggtcaacgacgaatgc
gaatccgtcgtcttcatgctctggggttcttatgcccaacgcaaggccgcttttgtcgat
acgtcgcggcatatggtgctcaaagcgccgcatccgtcgccgctttcagcccataatggt
ttttttggctgcaagcatttttccaaggcgaatgccttcctgcaatcccgcgggcgggcg
ccgatcgactggcagttgccggtcgatcctcacggctcttaa
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