Rhizobium phaseoli: AMC79_CH03504
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Entry
AMC79_CH03504 CDS
T04590
Symbol
rpoH-1
Name
(GenBank) RNA polymerase sigma-32 factor RpoH 1
KO
K03089
RNA polymerase sigma-32 factor
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpha03021
]
AMC79_CH03504 (rpoH-1)
Transcription machinery [BR:
rpha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMC79_CH03504 (rpoH-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Sigma70_r3
DUF3431
IF2_N
DUF6847
Motif
Other DBs
NCBI-ProteinID:
ANL99264
LinkDB
All DBs
Position
3558918..3559826
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AA seq
302 aa
AA seq
DB search
MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVSEIATKLNVSEEEVISMNRRL
SGDASLNAPIKAAEGDSGQWQDWLVDDHESQEDVLIEQDELETRRRMLSKAMSVLNERER
RIFEARRLAEEPVTLEDLSAEFDISRERVRQIEVRAFEKVQDAVRKEALERAKAVRVVEA
TP
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaataccttgccgtccattaccgccggcgaagccggcctcaatcgttatctc
gacgaaatccgcaaatttccgatgctcgagccgcagcaggaatatatgctggccaagcgt
tatgccgagcacggcgaccgcgacgccgcccacaagctcgtcaccagccatctgcgcctc
gtcgcgaagatcgccatgggttatcgcggctacggcctgccgatcggcgaagtcgtctcc
gaaggcaatgtcggcctgatgcaggctgtcaagaaattcgatccggagcgcggcttccgc
ctcgccacctatgccatgtggtggatcaaggcctcgattcaggaatatatcctgcggtcg
tggtcgctggtgaagatggggacgaccgcaaaccagaagcgtctgttcttcaacctgcgt
cggctgaagggccgcattcaggcgatcgacgatggcgacctgaagccggagcacgtatcg
gaaatcgccaccaagctgaacgtctcggaggaggaagtcatttcgatgaaccgccgcctc
tccggcgacgcctcgctgaacgcgccgatcaaggcggccgaaggcgacagcggtcagtgg
caggactggcttgtggatgatcacgaaagccaggaagacgtactgatcgagcaggacgag
ctcgaaacccgccggcgcatgctgagcaaagcgatgagcgtgctgaacgaacgcgagcgc
cgtatcttcgaggcccgccgcctcgccgaggagccggtgaccctggaagacctttcggcc
gagttcgacatcagccgcgaacgcgtccgccagatcgaggttcgcgccttcgagaaggtg
caggacgctgtccgcaaggaagccctcgaacgcgccaaagccgtccgcgtcgtcgaagcc
acgccctga
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