Rhizobium phaseoli: AMC79_CH04002
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Entry
AMC79_CH04002 CDS
T04590
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha00300
Lysine biosynthesis
rpha00470
D-Amino acid metabolism
rpha01100
Metabolic pathways
rpha01110
Biosynthesis of secondary metabolites
rpha01120
Microbial metabolism in diverse environments
rpha01230
Biosynthesis of amino acids
Module
rpha_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMC79_CH04002 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMC79_CH04002 (lysA)
Enzymes [BR:
rpha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AMC79_CH04002 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANL99733
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Position
4087589..4088857
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AA seq
422 aa
AA seq
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MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIDVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL
GVPYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGGDFHAIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagtaccgcgacggcatccttcacgccgagaacgttcccgttcccgag
atcgccaaggcggtcggcacgccgttctacgtctattccaccgcgaccctggaacgccat
taccgggtcttctccgaagccttcgccgatatggactcgatggtgtgctacgcgatgaag
gcgaattcgaaccaggcggtactgaagacgctgggtcgcctcggcgccggcatcgacgtc
gtctcggaaggggaactgcgccgcgcgctcgcagccgacattccggcaagccgcatcatg
ttttcaggtgtcggcaagaccccatccgagatggatttcgctctcgaggccggcatctac
tgcttcaacgtcgaatccgaacccgagcttgaaatcctcaaccagcgcgccgtcagcgcc
ggaaagaaagctcccgtctccttccgtatcaacccggatgtcgacgccaagacgcattcg
aagatctcaacgggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcg
atctatgcccatgccgccaagctgccaggcatcgacgtcaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagcctttcgatgacgctttcaagctgctgcgcgacctc
gtcgcgacgctccgcgccgatggccacacgatcgatcacgtcgacatcggcggcggcctc
ggggtcccctataaggacgacaacaatccgccgccgctgccggatgcctatgcggcgatc
gtcaagaaccagctgcgcgatctgaactgcaaggtcatcaccgagcccggccgcctgatc
gtcggcaatgccggtatcctcgtgaccgaggtgctctatgtgaaggacggcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaacgatctcattcgcccgaccctctacgaggcc
tatcacgaaatccgccctgtgacgatttcggcggcgaacgcgccgcgcatccgcgccgac
gtcgtcggccccgtctgcgagaccggcgactatctggcgctcgaccgcgaaatggcgatg
ccgaagcccggtgatctgctggccgtcagcacggccggcgcctatggcgccgtccaggcc
ggcacctataacagccgcctgctggtccccgaagtcctggtcaagggcggcgacttccat
gcgatacgaccgcgtcgaacctatgccgagctgatcagcctcgactctgttcccgcctgg
ctcgactga
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