Rhizobium phaseoli: AMC79_CH04032
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Entry
AMC79_CH04032 CDS
T04590
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpha03036
]
AMC79_CH04032 (xerD)
Chromosome and associated proteins [BR:
rpha03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AMC79_CH04032 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
ANL99763
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All DBs
Position
4115766..4116719
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AA seq
317 aa
AA seq
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MRDLGRVHVESFLEMMSAERGAAANTLQSYERDLDDIRSFLNGRSIRLTEAASADLSAYL
ASLANQGFKPSSQARRLAAMRQFYKFLYAEGIRTDDPTGVLDAPKKGRPLPKTMGVEEVG
RLLSQAQTEADDPAPGQLQRLRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGK
GNKERLVPLSQSAIKALKSYGRLLAAENAAAKDPQESPWLFPAASREGYLPRQVFARDLK
NLAIRAGLTPSMISPHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQ
QLVQTHHPLAKQAKKHE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagggatctcggccgcgtccatgtggaatccttcctggagatgatgagcgccgaacgc
ggtgccgccgccaacacgctgcaatcctatgagcgcgacctcgatgacatcaggtccttc
ctgaacggccgcagcataaggttgaccgaagccgcctccgccgacctttccgcctatctc
gcctcgctcgccaaccagggtttcaagccctcctcgcaggcgcgccggcttgcggccatg
cggcagttctacaagttcctctacgccgaaggcattcgcaccgacgacccgaccggcgtg
ctcgacgcgccgaagaaaggccggccgctgccgaagacgatgggggtcgaggaagtcggc
aggctgctgtcgcaggcgcagaccgaggccgacgatccggctccgggccagttgcagcgc
ctgcgcatgctggcgctcttggagctgctttatgccaccggcatgcgcgtcagcgaactc
gtctcgcttcccgcccgcgtcctcgaccaggagggccgcttcttgatgatccgcggcaag
ggcaataaggagcggctggtgccgttgtcgcaatcggcgatcaaggccctgaagtcctat
ggccggctgctggcggcggaaaacgccgcggccaaggatccgcaggaaagcccctggctg
tttcccgccgcctccagggaaggctatctgccgcgccaggttttcgcccgcgacctgaag
aacctcgcgatccgcgccggtctgacgccctcgatgatctcgccgcacgtcatgcgccac
gcctttgccagccatctgctcgccaacggcgccgatctgcgcgtcgtgcaggaactcctc
ggtcattcggacatttcgaccacacagatctacacacatgtgctcgaagagaggctgcag
caactcgtccagacgcatcacccccttgccaaacaggcgaaaaagcacgaatag
DBGET
integrated database retrieval system
