Rhizobium phaseoli: AMC79_CH04153
Help
Entry
AMC79_CH04153 CDS
T04590
Name
(GenBank) RNA ligase LigT-like protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpha03016
]
AMC79_CH04153
Enzymes [BR:
rpha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AMC79_CH04153
Transfer RNA biogenesis [BR:
rpha03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AMC79_CH04153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ANL99883
LinkDB
All DBs
Position
complement(4237162..4237755)
Genome browser
AA seq
197 aa
AA seq
DB search
MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVERLDR
IDRPEFQFRLEGIGSFGSKKPHSVWAGVSQSPEMYALQGEIERICQRIGLPPDPRKFMPH
VTLARLKSSRLDDVVQYLAGRGNFHTATFTAPRFVLLSSRESVGGGPYLTEEVFPLHEAR
STPSASSRLLQPVKSLV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggcgatgagcctttcattg
ctgcgcggtggcctccccggagcacgatggatcgatgtggagaattaccacatcaccctg
cgcttcatcggtgatgtcgacggccgcacggccgatgaaatcgtcgaacggctcgaccgg
atcgaccggccggaattccaattccggctcgaaggcattggttccttcggctcgaagaaa
ccgcattcggtctgggccggcgtctcgcaatcgccggagatgtatgccctgcagggtgag
atcgagcgcatctgccagcgcatcggcttgccgccggacccgcgcaaattcatgccgcat
gtgacgctggcacggctgaaatcctcgcggctcgacgatgtcgtgcaatatctggccgga
cgcggcaacttccacaccgcgaccttcacggcaccgcgcttcgtgctgctttcgtcgcgc
gaatcggttggcggtggaccctacctgacagaggaagtgttcccgctgcacgaggcacgt
tcgactcccagcgcttcgagcaggctgctgcagccggtcaagagcctggtatag
DBGET
integrated database retrieval system
