Rhizobium phaseoli: AMC79_CH04172
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Entry
AMC79_CH04172 CDS
T04590
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha00300
Lysine biosynthesis
rpha00470
D-Amino acid metabolism
rpha01100
Metabolic pathways
rpha01110
Biosynthesis of secondary metabolites
rpha01120
Microbial metabolism in diverse environments
rpha01230
Biosynthesis of amino acids
Module
rpha_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMC79_CH04172 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMC79_CH04172 (dapF)
Enzymes [BR:
rpha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AMC79_CH04172 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ANL99901
LinkDB
All DBs
Position
complement(4255128..4256033)
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AA seq
301 aa
AA seq
DB search
MSATVEFARMNGLGNKILVIDMRGRPDKVTPAAAVALNADPETEFDQIMAIHDPKADGTD
AFIDILNSDGSKAQACGNGTRCVVQALAAETGRKAFTFQTVAGILNAVEHEDGTISVDMG
KPVFDWDKIPLSEEFHDTSRIELQIGPIDNPALHSPSALSMGNPHAIFWVDRDVMSYDLA
RFGPLLENHPMFPERANITLAQVTSPTSMTTRTWERGAGLTLACGSAACSAAVSAARTGR
TGRKVTINVASAKPPATLSIEWRERDDHVIMTGPAEWEWSGRLDPATGHWSRDADRGAEA
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacggtcgaattcgcgaggatgaacgggcttggcaacaagatcctggtcatc
gacatgcgcggccggcccgacaaggtgacgcccgcggcagccgtcgcgctcaatgccgat
cctgaaaccgagttcgatcagatcatggcgatccatgatccgaaggccgatggcaccgat
gccttcatcgacatcctgaattccgacggctcgaaggcgcaggcctgcggcaacggcaca
cgctgcgtcgtgcaggcgctcgccgccgagaccggccggaaggcgttcaccttccagacg
gtcgccggcattctcaacgccgtcgagcacgaggacgggacgatctccgtcgatatggga
aagccggtgttcgattgggacaagatcccgctctcagaagaattccacgacaccagccgc
atcgagcttcagatcggcccgatcgacaatccggcgctgcattcgccttcggccttgtcg
atgggcaatccgcatgcgatcttctgggtggacagggacgtgatgtcctatgatctcgcc
cgcttcggaccgctgctcgaaaaccatccgatgtttcccgagcgggccaatatcaccttg
gcgcaggtcacctcgccgacatcgatgacgacgcgcacctgggagcgcggcgccggcctg
acgcttgcctgcggctcggccgcctgttctgccgccgtcagcgccgcgcgcaccggccgc
accggccgcaaggtgacgatcaatgtggcaagcgccaagccgccggcgacactttcgatc
gaatggcgcgagcgcgacgatcacgtcatcatgaccggtccggccgagtgggagtggtcg
ggcaggctcgatcctgcgaccggccactggtcgcgcgatgcggaccggggagccgaggcg
cagtga
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