Rhizobium phaseoli: AMC79_PB00196
Help
Entry
AMC79_PB00196 CDS
T04590
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
KO
K10979
DNA end-binding protein Ku
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AMC79_PB00196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_PB00196
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AMC79_PB00196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ANM00611
LinkDB
All DBs
Position
pRphaN261b:215602..216501
Genome browser
AA seq
299 aa
AA seq
DB search
MVAPRANWKGFIKFGEVAFPVALYTAASTSERIAFHTLNRKTGNRVRREFVDGETGDPVE
REDQVKGFEIEDGRYVVLEPEEVAAAVPESDKTLKVEAFIPYDEVDDVYFDKPYYLAPDT
MGSDAFKLLRDGMKKAKVAAIARTVLFRRLRTLLIRPLGKGLVGSTLNFDYEVRSSEKAF
EEMPDLKIEGEMLELAKHIINTKKGEFDPKEFNDRYEAAVAELVKAKIEGRALPKKKAPP
AVKPNDLLQALRESAGMTAPAKTKRTAANANAGKSRQKAARASAPKSRSPGGAHQRRTG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttgccccgagagcgaattggaaaggctttatcaagttcggagaggtcgctttcccc
gtggcgctctacaccgccgcctccacatccgagcggattgcgtttcacacgttgaacagg
aagaccggcaatcgggtgcgccgggaattcgtggacggcgagaccggcgatccggtcgaa
cgcgaggaccaggtcaagggtttcgagatcgaagatggtcgctatgttgtcctcgagccc
gaggaggtcgccgccgccgttcccgaaagcgacaaaacgctgaaagtggaggcatttatt
ccttatgacgaggtcgacgacgtctatttcgacaagccttattatctggccccagacacg
atgggcagcgacgcattcaagctgctgagggatggcatgaagaaggccaaggtcgcggcc
atcgcccggacggtgctgttccggcgcctgcggacgcttctcatccgccccctcggcaaa
gggctggtgggctccactttgaacttcgactatgaagtccgctcctccgagaaggctttc
gaggagatgccggatctcaagatcgaaggcgagatgctggagcttgccaagcatatcatc
aacaccaagaagggcgagttcgatccgaaggaattcaacgatcgttacgaagcggccgtc
gccgaactggtgaaggccaagatcgaaggccgcgccctgccaaagaaaaaagccccaccc
gctgtgaagccgaacgacctgttgcaggcgctgcgtgaaagcgccggcatgacggctcca
gcaaagacgaagcgcaccgccgcaaatgccaatgccggcaagagcaggcagaaggccgca
cgcgcatcggcgccgaaatcccgcagccccggcggcgcccatcagcgccgcaccgggtga
DBGET
integrated database retrieval system
