Rhizobium phaseoli: AMC79_PD00560
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Entry
AMC79_PD00560 CDS
T04590
Symbol
groEL-3
Name
(GenBank) chaperonin GroEL 3
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMC79_PD00560 (groEL-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpha03019
]
AMC79_PD00560 (groEL-3)
03110 Chaperones and folding catalysts [BR:
rpha03110
]
AMC79_PD00560 (groEL-3)
03029 Mitochondrial biogenesis [BR:
rpha03029
]
AMC79_PD00560 (groEL-3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpha04147
]
AMC79_PD00560 (groEL-3)
Enzymes [BR:
rpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AMC79_PD00560 (groEL-3)
Messenger RNA biogenesis [BR:
rpha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AMC79_PD00560 (groEL-3)
Chaperones and folding catalysts [BR:
rpha03110
]
Heat shock proteins
HSP60 / Chaperonin
AMC79_PD00560 (groEL-3)
Mitochondrial biogenesis [BR:
rpha03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AMC79_PD00560 (groEL-3)
Exosome [BR:
rpha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AMC79_PD00560 (groEL-3)
Exosomal proteins of other body fluids (saliva and urine)
AMC79_PD00560 (groEL-3)
Exosomal proteins of breast cancer cells
AMC79_PD00560 (groEL-3)
Exosomal proteins of colorectal cancer cells
AMC79_PD00560 (groEL-3)
Exosomal proteins of bladder cancer cells
AMC79_PD00560 (groEL-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ANM01728
LinkDB
All DBs
Position
pRphaN261d:601166..602794
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVKFNVEAREKLLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVREGAKAVTSGMNPMDLKRGI
DLAVAAIVAELKANARNISNNSEIAQVGTISANGDAEIGRFLAEAMEKVGNDGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDPYILIHEKKLSNLQSMLPILEAV
VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAVLTAGTV
ISEDLGIKLESVTLDMLGRAKKVSVEKENTTIVDGSGAKSDIEGRIAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RAVKALENVQTANSDQRVGVDIVRRALEAPARQIAENAGAEGSVVVGKLREKTEFSYGWN
AQTGEFGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMVAEKPKKDAAPPLPPGAGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagtcaaattcaacgtcgaagcccgcgagaagctgttgcgcggcgtc
gacatcctggccaacgccgtcaaggtgacccttggcccgaaaggccgcaacgtcgtgatc
gacaaatccttcggcgcgccgcgcatcaccaaggacggcgtttcggttgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagtcgcttcgaag
accagtgacatcgccggcgacggcaccacgaccgcgacggttctcgcccaggcgatcgtc
agggagggcgccaaagccgttacctcaggcatgaacccgatggacctgaagcgcggcatc
gatctcgccgtcgccgccatcgtcgcggaactgaaggccaacgcccgtaatatttccaac
aattccgagatcgcccaggtcggcacgatctccgccaatggcgatgctgaaatcggccgc
ttcctggcggaggcgatggaaaaggtcgggaatgacggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcgggtacctc
agcccctatttcgtcaccaatgccgacaagatgcgggtcgagttcgaggatccctatatc
ctgatccacgagaaaaagctctcgaacctgcagtcgatgctcccgatcctcgaggctgtc
gtccaatcaggcaagccgctgctcatcatcgctgaagacgtcgaaggcgaagcccttgca
acgctcgtcgtcaacaagctgcgcggcgggctgaagattgctgccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccgtgctcaccgccggcaccgtc
atctccgaagacctcggcatcaagctcgagagcgtcacgctcgacatgctcggtcgggcg
aagaaagtgtcggttgagaaggagaacaccacgatcgtcgacggttcgggcgccaagtcc
gacatcgaaggccgtatcgcccagatcaaggcccaaatcgaagaaaccacctccgactac
gatcgcgagaagctgcaggaacgtcttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcgtcgacgacgcgctt
cacgccacccgcgcggcggtcgaggaaggcatcctgccaggcggcggcgtggcgctgctg
cgcgccgtcaaggcgcttgaaaatgtgcagaccgccaattccgaccagcgcgtcggcgtc
gatatcgttcgccgcgcacttgaggcgccagcgcgccagatcgcggagaacgccggcgcg
gaaggctcggtggtcgtcggcaagctgcgtgaaaagaccgagttctcctatggctggaac
gcccagacgggcgaatttggcgacctctatgcgcagggcgtcatcgatccggccaaggtt
gttcgcaccgcgcttcaggatgcggcctccatcgccggtcttctcgtcacgacggaagcc
atggtcgccgagaagccgaagaaggatgccgctccgccattgccccccggtgccggcatg
gatttctga
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