Roseovarius phycicola: RZ517_01050
Help
Entry
RZ517_01050 CDS
T10600
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphc03400
]
RZ517_01050 (addA)
Enzymes [BR:
rphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RZ517_01050 (addA)
DNA repair and recombination proteins [BR:
rphc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RZ517_01050 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF3638
AAA_30
DUF2000
Motif
Other DBs
NCBI-ProteinID:
WWR46799
UniProt:
A0ABZ2HKT1
LinkDB
All DBs
Position
217689..221069
Genome browser
AA seq
1126 aa
AA seq
DB search
MRDLPTQRQIDAAQPECSTWLSANAGSGKTKVLTDRVARLLLEGVDPQNILCLTFTKAAA
AEMQNRLFERLGGWSMLPDPALRQELGALGIDGTISTQALGNARRLFAIAIETPGGLKIQ
TIHSFCSSLLRRFPLEAGISPHFVEMDERADQRLREEIIESVAAGPNKASLQALAEQFTG
ESFADLTQNIAKHRDAFRHSKTDDIHEVLNLPEDASEQSALEIAFDGTEGSFWSHMLGLM
RGIGGATYPALADRLSGVDTDRPTRGDLEILFEVFLYKSSSGTNLKWASKSVNFPPSTHK
NAIAQLAPIIDQLHAFMDRMAAAKQMLLALDTARKSAVLYDFANVFLQTYQEVKLQQGLL
DFDDLILKARDLLTDRKVADWVLYKLDGGIDHILIDEAQDNSPEQWELIDRLASEFTVGQ
GAQAEKQRTIFVVGDKKQSIYSFQGADPDGFDRMKADFAARLASVNTPLQDMEMEYSFRS
ARTILQVVDHAFSGYETSGFTQREPHKSFKSDMPGRVDLWPVFDKPKDTQTPDWYMPVDV
LAEDDPATLLARDIAHQIQSMIGTPLPDKDGISARPITAGDVLILVQRRSKIFHEIIREC
KQRGLPVAGSDRLRVTAELAVRDLLALLSFLATPEDDLSLAAILRSPLFGWSEAQLFDLA
HARKQKYLWAELRDRKANFAETVSILDDLRDKADFLRPYDLLERCLTRHNGRHLLLSRLG
QEAEDGIDALLGLAMSFETQSVDSLTGFLVWMEADKLEIKRQMDTTGDRIRVMTVHGAKG
LEAPIVILPDCAKRDVRLHSHIVVPHGTPLWRPATDDLPMRLRDAREEERAAQNAERDRL
LYVAMTRAEQWLIVAASGELDKDGRDWYSKVKAGLLSASAHPYEFMNGTGLRLEDGRWTV
DVSKGAACSEKERPELPGFFSETVSKIAKSSEILTPSDLGGAKALPSEEGQDEVAAKRRG
RQIHMLLEHLPATSANHWQSRAEDLLSFGPDRAEPAELNDLLAEASQVLTNPNLSVLFAK
DSLAEVSVSANIEALSGRRIHGVVDRLIVSDEKILVVDFKTNAAVPATPETCPDGLLRQM
GAYAHALQQIYPNREVETALLWTRTATLMHLPHDLVTDAVKNTHIS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaccttcccacccaacgccaaatcgacgcggcgcaacccgagtgctcgacctgg
ctttcggccaatgccggatcgggcaagacaaaagtcctgacagatcgggttgcgcgcctt
ttgcttgagggcgtagatccacagaacatactttgcctcaccttcaccaaggcagcggcc
gccgagatgcaaaaccggctgtttgaacggcttggtggctggtcgatgttgcccgacccg
gcacttcgtcaggaactgggagcgctgggcatagacggaaccatttcgacccaagcacta
ggaaatgcgcgccgcctctttgccatcgcgattgaaacaccaggtggcctcaaaatacag
acgatccactctttttgctcgtcgcttttgcggcgcttcccgctggaggccgggatttct
ccgcattttgtggagatggacgaacgcgcagatcagcggctgcgcgaagagatcattgaa
tccgttgctgccggcccgaacaaggcaagtttgcaggcactggcagagcaattcactggt
gagagctttgccgacctgacacaaaatatcgcaaaacaccgcgacgcgtttcgccactcc
aaaacagacgacattcatgaggttctgaacctgcctgaggatgcgtcagaacaatctgct
cttgagatcgcgtttgatggcaccgaagggtcgttttggtcgcacatgcttgggctgatg
cgcggcattggcggggcaacctatccggcgctggccgaccgcctttccggggttgatacg
gacaggccgacacgcggtgatttggagatcttgtttgaggtgtttctctacaaaagctcc
agtggcacaaacctgaaatgggcgtcaaagtcggtcaatttcccgccaagcacccataaa
aacgcgattgcacagctcgccccgatcattgatcaactccatgcctttatggatcgcatg
gcagcggccaaacagatgctattggcgttggacaccgctcgaaaatctgccgtgctctac
gatttcgcaaacgtgttcctgcagacctaccaagaggtcaagctgcaacagggattgctc
gatttcgatgacctcattctcaaggcccgcgatcttctgacagaccgcaaggttgcggat
tgggtgctctacaaactcgacggcgggattgatcatatcctgattgatgaggcacaggac
aacagccccgaacaatgggagctgatcgacaggcttgcctcggaattcactgtcgggcag
ggcgcacaagccgaaaaacagcgcacgattttcgttgtcggagacaaaaaacagtcaatc
tattcctttcagggggccgaccctgacggatttgaccgcatgaaggcggattttgccgcg
cgactggcatctgtgaacaccccgctgcaggacatggagatggaatattcatttcgctct
gcgcggacgatcctgcaggtcgtcgatcacgccttttccggatacgaaaccagtggcttt
acccagcgcgaaccgcataaatccttcaagtcggacatgccggggcgtgttgatctttgg
cctgtttttgacaaacccaaagacacccagacccctgattggtatatgcccgtcgatgtc
ctcgccgaggacgatcccgccaccctattggcgcgcgacatcgcgcatcagatccagtcg
atgatcggcacacctttacctgacaaggatgggatttcggcacgcccgatcactgcgggc
gatgtcctgatcctcgtgcaacggcgatcaaaaatcttccacgagatcattcgcgagtgc
aaacagcgcggcctgccggtcgccggctcggaccgccttcgcgtcaccgcggaactggct
gttcgtgaccttctcgcgctgctgtctttcctcgccacaccagaagatgacctgtcgctc
gcagccatcctgcgttcaccgctctttggctggagcgaggcgcagctgttcgatctcgcc
catgcacgaaagcagaaatatctctgggccgaattgcgcgatcgcaaagcgaatttcgca
gaaacagtctcgattcttgacgatctgcgagacaaggccgacttcctgcgcccctatgat
cttttggaacgctgcctcacgcgccacaacggtcgacacctgctgttgtcccgcctgggc
caggaggcagaggacggcatcgacgcgctcttgggtctcgccatgtcgtttgagacccaa
tctgtcgacagcctgacaggctttcttgtctggatggaggcggacaagctcgaaatcaaa
cgccagatggacacaacgggcgaccgcattcgcgtgatgaccgtgcatggcgccaaaggt
ctggaagccccgattgtcattctgccggattgtgccaagcgcgatgttcgtcttcactcg
cacattgtcgtgcctcacggcacgccgctttggcgcccggccaccgatgatcttcctatg
cggctgcgcgacgcccgggaagaagaacgcgcggcccaaaacgcagaacgtgatcggctg
ctttatgttgccatgacccgcgctgaacaatggctcattgtcgccgcgtcaggggagctc
gataaagacggccgggattggtacagcaaggtcaaagctgggctgctgtctgcctcggct
cacccctatgagttcatgaacggcacaggccttcggcttgaggatgggcgatggacggtg
gacgtgtctaaaggcgcggcatgttccgagaaagaaaggcccgagctaccgggcttcttt
tcagaaacagtctctaaaattgcgaaatccagtgaaattctgacaccgtcagacctcggt
ggcgccaaggcgctcccatcagaggaggggcaagatgaggtggccgccaagcgacgagga
cggcaaattcacatgctgctggaacatttgcccgcgacctccgccaaccactggcagtcc
cgcgccgaagacctgctctctttcggaccagaccgggccgagcccgcagagctcaacgat
cttttggccgaggcgtcgcaggtgctcaccaacccaaacctgagcgtcttgtttgcaaag
gacagcctcgcagaagtctccgtttcggccaatatcgaggcgctttcgggccgccgcatt
cacggtgtcgtggaccgtttgattgtatccgacgaaaaaattctggtggtcgactttaaa
accaacgccgccgtgcctgcgacacccgaaacctgccctgacggcctgctgcgccaaatg
ggggcgtatgcccatgctttgcaacagatttacccaaaccgtgaggtggaaacagccctg
ctctggacgcggaccgcaacgcttatgcacctgccacacgatcttgtgacagacgcggtg
aagaacacccatatatcttga
DBGET
integrated database retrieval system
