Roseovarius phycicola: RZ517_01465
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Entry
RZ517_01465 CDS
T10600
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphc03016
]
RZ517_01465 (truB)
Enzymes [BR:
rphc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RZ517_01465 (truB)
Transfer RNA biogenesis [BR:
rphc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RZ517_01465 (truB)
Prokaryotic type
RZ517_01465 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WWR46880
LinkDB
All DBs
Position
299211..300131
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AA seq
306 aa
AA seq
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MGRKRKGRTLSGWLVVDKPAGITSTAVVNKVRWALQAQKAGHAGTLDPEATGVLAVALGE
ATKTVPYVTDALKCYRFTVRLGQATNTDDAEGEVIKESEVRPDDATIKAALGQFVGDIEQ
VPPKFSAVKIDGQRAYKLARDGEDFDVEARPLWVEELILTDRANADTIELEMTCGKGGYV
RSIARDLGAALGCYGHVLSLRRLWSGPFQAEDGLTMDQIDAMAHSPELDSYLKPLEVGLA
DLPKTICTDTGLARLRNGNPGLVIASDLDYGEECWAAYDDRAVAVGRFKGGELHPSRVFN
QDASNG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtaagcgcaaaggccgcacgctatcgggatggttggtcgtggacaaacccgca
gggataacatcgaccgcagttgtgaacaaagttcgctgggcgctacaggcgcaaaaagcc
gggcatgccggcacgcttgatccagaggcaactggtgtactggccgtggcgttgggtgag
gccacaaaaaccgtcccctatgtcactgacgcactgaagtgctatcggtttacagtgaga
ttgggacaagcaaccaacaccgatgatgcggaaggcgaggtgatcaaggaaagtgaggtg
cgcccggatgatgccaccatcaaggcagcactgggtcagttcgtcggggatatcgaacag
gtcccgcccaaattttcggcagtaaaaatagacggtcaacgcgcctacaaattagcgcgc
gacggtgaggattttgacgtcgaggcgcgcccgctctgggtggaagaactgatcctgacc
gatcgggcgaatgcagatacaattgagcttgaaatgacctgcggcaaaggcggatacgtt
cgctccatcgccagggatctcggcgcggcgctgggctgttatggccatgttctttcgctt
cggcgactatggtcggggccgtttcaggccgaggatgggctgaccatggatcagattgat
gctatggcgcatagcccggaactggactcctacctgaagccactcgaggttggactggcc
gatcttccgaaaaccatatgcaccgacacgggtctggcacgtttgcgcaatggcaatccg
ggacttgtgattgcctcggatcttgactatggcgaagagtgttgggcggcctatgatgac
cgcgctgtggccgttgggcgcttcaagggcggggaattgcatccctcgcgggttttcaat
caggatgcctcaaatgggtga
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