Roseovarius phycicola: RZ517_02385
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Entry
RZ517_02385 CDS
T10600
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphc03000
]
RZ517_02385
Transcription factors [BR:
rphc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RZ517_02385
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_3
Peripla_BP_4
HTH_23
Sigma54_DBD
Sigma70_r4
HTH_31
HTH_3
HTH_IclR
TrmB
HTH_10
PDZ_Tricorn
HTH_24
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WWR47059
UniProt:
A0ABZ2HJS4
LinkDB
All DBs
Position
complement(483822..484847)
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AA seq
341 aa
AA seq
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MTKHDNRPLTLRDVSEASGVSEMTVSRVLRNRGDVSDATRARVLEAAKTLGYVPNKIAGA
LASQRVNLVAVIIPSMSNMVFPEVMTGISQILDETGLQPVVGITGYMPEKEEQVLYEMLS
WRPSGVIIAGLEHSDASRAMLRAAGIPVVEIMDVDGTPVDSVVGISHRRAGQQMAQAILK
AGYEHIAFLGTKMLLDHRARKRFEGFTETLAKAGVEIEDSDFYSGGSALAKGREMTRDVL
NRSPDLDFIYYSNDLIGAGGLLYLIEQGVDIPKEMGLAGFNGVNLLRGLPQELATMDSCR
LEIGRRAAEIIIERSGSETPQDPKRIVLEPKITYGDTLRVR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaacatgacaaccgccccctgaccctccgcgatgtgtctgaggcgtcgggcgtg
tcggaaatgactgtaagccgcgtgttacgcaatcgcggggatgtctcggacgccacacgc
gcgcgggttttggaggcggccaagactctgggttatgtgcccaacaagatcgctggggcg
cttgccagtcaacgagtgaaccttgtagcggtcatcattccgtccatgtccaatatggtt
ttccccgaggtgatgaccgggattagtcagatattggacgaaaccgggcttcaacctgtg
gtggggataaccggatatatgcctgaaaaggaagagcaggttctttatgaaatgctctcc
tggcgcccctctggtgtgatcatcgcagggctggaacattccgatgcgagccgagcgatg
ctgcgcgccgcgggcataccagtggttgagatcatggatgtggacggcacgccggtagac
tcggttgtgggcatctcgcatcgccgagcgggtcaacagatggcgcaggcgatcctgaag
gcggggtatgagcatatcgcctttctgggcaccaagatgttgcttgatcaccgggcgcgc
aaacggttcgaagggttcactgagaccctggccaaggcgggtgtcgagattgaagacagc
gatttttattcgggcggatccgctctggcgaaaggccgcgagatgacgcgcgatgtgctg
aaccgaagcccagacctcgactttatctattattcgaacgatctgatcggtgcgggcggg
ctgctctatctcattgagcagggcgtcgatatccccaaagagatgggccttgccgggttc
aatggggtgaacctgttgcgaggcttgccacaggaactggccacgatggattcttgtcgg
ttggaaattggccgtcgcgctgccgagatcattatcgagcgatcagggtctgaaaccccg
caagaccccaagcggatcgtacttgagccaaagatcacctacggcgatacgttgcgcgtt
cgatag
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