Roseovarius phycicola: RZ517_02675
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Entry
RZ517_02675 CDS
T10600
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
rphc Roseovarius phycicola
Pathway
rphc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RZ517_02675
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphc01007
]
RZ517_02675
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphc03016
]
RZ517_02675
Enzymes [BR:
rphc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RZ517_02675
Amino acid related enzymes [BR:
rphc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RZ517_02675
Transfer RNA biogenesis [BR:
rphc03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RZ517_02675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1c
tRNA-synt_1
tRNA-synt_1b
tRNA-synt_1e
DUF7014
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
WWR47106
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Position
543198..544772
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AA seq
524 aa
AA seq
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MSDLRDAALSSKAWPFEEARRLLKRYEKGAPDKGYVLFETGYGPSGLPHIGTFGEVLRTT
MVRHAFEQISDIPTKLICFSDDLDGMRKVPGNVPNPEMLQEHLHRPLTVVPDPFGEYESF
GHHNNAMLRRFLDTFGFEYEFISAREFYRTGQLDEILLRCAERYDDLMKIMLKSLREERQ
QTYSIFLPIHPETGRVLYVPMKHVDAKEGTVTFDDETGKEWTLPVTGGNVKLQWKPDFGA
RWAALGVDFEMYGKEHATNEKIYDAICRTLGARPPEHFSYELFLDDQGQKISKSSGNGIS
IDEWLSYAATESLSYFMYQKPKTAKRLYFDVIPRAVDEYHQQLRAYPGQDAAQKVNNPVH
HIHNGDVPESKMVVPFAMLLNLASVSSAEDKDTLWGFIRRYAPEASAETHPDMDAAAGCA
VKYYEDFVAPTKTYRAPSDLEREALSDLRDQLAAYDGPVEDEALQSIVYAVGRDRFEPLR
DWFKAIYEVLLGASQGPRFGGFIALYGLEETVALIDKALAGELV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctacgcgatgctgccctaagctcgaaagcctggccttttgaagaagcacgt
cgcctgctcaaacgctatgaaaagggggctcctgacaaggggtatgttcttttcgaaacc
ggctacgggccgtcgggcctgccgcatattggcacctttggagaggtgctgcgcacgacc
atggtgcggcacgcctttgaacagatcagcgacattcccaccaaacttatctgcttttcg
gatgatctggatggcatgcgcaaggtgcccggcaatgtcccgaacccggagatgttgcag
gaacacttgcacaggccgctgaccgtggtgcccgatccctttggggaatacgagagtttt
ggccaccataacaatgctatgctgcggcggtttcttgatacgttcgggtttgaatacgag
ttcatctcggcccgcgaattttaccgcaccggacagcttgatgagatcttgcttcgctgc
gccgagcggtacgatgatctgatgaagatcatgctgaaatccctgcgtgaggagcggcaa
cagacctattcgatttttttgccgatccaccccgaaacggggcgtgtgctttatgtgccg
atgaaacatgtggacgccaaagagggcacagtcacctttgacgacgagacgggcaaggag
tggacgctgccggtgactggcggaaatgtgaagctccagtggaagccggattttggcgca
cgctgggccgcgcttggcgtggatttcgagatgtatggcaaggaacatgccaccaacgag
aaaatctatgacgccatctgccgaaccctgggggcccgtccgcccgagcatttcagctat
gagcttttcctcgatgatcagggtcagaagatttccaaatcctcgggcaacgggatcagc
attgatgaatggctgagctatgccgcgaccgagagcctgtcttacttcatgtatcaaaag
ccgaaaacggccaaacggctctattttgacgtgatcccgcgagccgtggatgaataccac
caacagctgcgcgcctatcccggtcaggatgctgcacaaaaggtcaacaacccggtgcat
cacatccacaacggcgatgtgcccgagagtaagatggtcgtcccatttgcgatgctcttg
aaccttgcgtctgtatcttcggccgaggacaaggatacgctttggggattcattcgccgc
tatgcaccagaggccagtgctgagacgcatccagacatggatgctgcagccggctgtgca
gtgaaatactatgaggatttcgttgcgcccaccaaaacctatcgcgcccccagcgatctg
gaacgtgaggcactcagcgatctgcgtgaccagctggccgcctatgacggccccgttgaa
gatgaggcgctacaatctatcgtctatgccgtgggccgtgaccggttcgagccgctgcgc
gattggttcaaggccatttacgaagttcttttgggcgcaagccaaggcccacgctttggc
ggtttcatcgcgctttatggtctggaggagaccgtagctctcatcgacaaggcgctggcg
ggcgaactcgtttga
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