Roseovarius phycicola: RZ517_04225
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Entry
RZ517_04225 CDS
T10600
Name
(GenBank) DegT/DnrJ/EryC1/StrS family aminotransferase
KO
K21131
GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:
4.2.1.168
]
Organism
rphc Roseovarius phycicola
Pathway
rphc00541
Biosynthesis of various nucleotide sugars
rphc01100
Metabolic pathways
rphc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RZ517_04225
Enzymes [BR:
rphc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.168 GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase
RZ517_04225
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Motif
Pfam:
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WWR47395
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Position
830427..831614
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AA seq
395 aa
AA seq
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MSDTDGFPLATTSWDDKEYAAIERVVKSGMFSMGAEVAKFEDQFARAMGSAHALMVNSGS
SANLIIVAALRYHSKHGLPEGAEVIVPAVSWSTTYYPLHQYGLLQKFVDIDPDTLNYDLE
ALADAITDETRAIMVVNLLGNPNEFDRIKAIIGDRNILILEDNCESLGATYQGRQAGTFG
IAGSYSSFFSHHIATMEGGLVVTDDEELYHIMLSVRSHGWTRHLPKVNHVTGEKSDDPFE
ESFKFVLPGYNLRPLEMSGAIGQEQIAKLPMIVSERRNNAEQFRALMQGYPQIRIQREIG
ESSWFGFSMVVEPDAGFSRADLIAALGKYNVDCRPIVAGDFAKNDVVTKHMAHVIHGELR
HANDIDQNGLFVGNHHYPLEGRWELLRAALDEVAG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccgacggattcccattggccaccacaagctgggacgacaaggaatacgcc
gccattgagcgcgtggtgaaatccggcatgttctcgatgggggcggaagtggccaagttc
gaagaccagtttgcccgcgccatgggatcggcccatgcgttgatggtcaattccgggtcg
tcggccaacctgatcatcgtggcggccctgcggtatcattccaaacacggtttgccggaa
ggggctgaagtcatcgtgcctgcggtgagctggtccacgacctactatccgctgcatcag
tatgggcttttgcaaaagttcgtggatatcgatcctgacacgctcaactatgatcttgag
gctctggcggacgccatcacggacgaaacgcgcgcgatcatggtggtgaaccttttgggc
aatcccaatgagtttgaccggatcaaagccatcatcggagaccggaacatcctgatcctg
gaagacaattgcgaaagccttggggccacctatcaggggcggcaggccggaacgtttggc
atcgcgggcagctattcatccttcttttcgcaccatatcgcgaccatggagggtggactt
gtcgtgacagacgacgaagaactctatcacatcatgctgtccgtgcgcagccatggctgg
acccggcacttgccgaaggtgaaccacgtaacgggcgaaaaatcggacgatccctttgag
gaaagcttcaagtttgtcctgcccgggtacaacctgcgcccgctagagatgagcggggcg
atcgggcaggaacagatcgctaaactgccgatgatcgtctctgagcgccgcaacaatgcc
gaacagttccgcgcgctcatgcagggataccctcagatccgcattcagcgggaaattggg
gagagcagctggtttggcttttcaatggtggtggaaccggatgcgggtttcagccgcgcc
gacctgatcgcggcactgggaaagtacaatgtcgattgccgtcccatcgtggcgggcgat
ttcgccaagaacgatgttgtaaccaagcacatggctcatgtgatccatggtgagctgcgt
catgccaatgatattgaccagaacgggctctttgtcggcaatcaccactatccgcttgaa
ggcagatgggaattgctgcgcgcggctttggatgaggttgcagggtag
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