Roseovarius phycicola: RZ517_08830
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Entry
RZ517_08830 CDS
T10600
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rphc Roseovarius phycicola
Pathway
rphc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZ517_08830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphc02000
]
RZ517_08830
Transporters [BR:
rphc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RZ517_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
RsgA_GTPase
AAA_25
AIG1
AAA_5
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
WWR48258
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Position
1732996..1734768
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AA seq
590 aa
AA seq
DB search
MLDSPLAKIENLQVRFATRQGVVKGVEDVSFDIFPGKTLCIVGESGSGKSVSALSLMRLV
EFGGGEITGGRVLFEAEGAARDLTQAAADTMRHLRGNNIAMIFQEPMTALNPVFTVERQL
TEGLRQHQGVSRKAARDRALELLQQVRLPEPERRLRQYPHELSGGMRQRVVIAMALACRP
KLLIADEPTTALDVTTQAEILALINRLKVETNAAVLFITHDMAVVAQVADRVVVMQDGRK
VEDGPVNDIFERPKAAYTKALLKAVPRLGQGSTVSKVTDSGPPLLEVKNLTTRFAVKGGM
LRRTVAELHAVEDVSFSLQPGRTLALVGESGSGKSTVGRSILRLVEPTSGAVQFDGQDIL
ALDAPGLRAARAGMQMIFQDPYASLNPQRRVADQVAEPLWNYAPMPRQDTEARVAELFDR
VHLPRDLLQRYPHELSGGQRQRVAIARALALNPKLIVADEAVSALDVSVQAEILSLFRDL
QADMGLSYLFISHDMAVVEQMSHEIAVMYLGRIVERGPRDAVLRDPRHSYTKALLSAVPV
PDPKRRITDDELNFKPNPSPIHKIGHDPGPSIYEEVTPGHHVLISDSGYD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacagtcctcttgccaagatcgaaaacctgcaagtgcgctttgcgacgaggcag
ggtgttgttaagggggtggaggatgtctccttcgatattttcccgggcaagacgctctgc
atcgtcggtgaatccggctcaggcaaatcggtctcggcgctttcgctgatgcggctggtc
gagtttggtggcggagaaatcacaggcgggcgggttctgtttgaggctgaaggcgcagcg
cgggacttgacgcaagccgctgctgacaccatgcgccatctgcgtggcaacaacattgcg
atgatctttcaggagccgatgaccgccctcaacccagtgtttacggtggaacggcaactc
accgaaggtttgcggcagcatcaaggcgtgagccgcaaagccgcgcgtgaccgagcgctg
gaattgttgcagcaagtgcgattgccagagccggagcggcgtctgcggcaatatccgcat
gagctttcgggtgggatgcgccaacgggtggtgattgccatggcgctggcctgtcggccc
aagctgctcatcgcggatgagccgaccacggcgcttgatgtgaccacgcaggccgagatc
ctggcgctgatcaaccggctcaaggtagaaaccaacgcggcggttctgtttatcacacat
gacatggcagtggtggcccaagtggcggatcgtgtggtggtcatgcaggatgggcgcaag
gttgaggacggtccggtcaacgacatctttgagcgacctaaagcggcctacaccaaggcg
ctgctcaaggctgttccgcgtctggggcaggggagtactgtctcaaaggtcacagattca
ggtccgccgttgcttgaggtcaaaaacctcaccacccgctttgccgtgaaggggggtatg
ctgcgccgcacggtggctgaactgcacgcggtcgaggacgtgtctttctcgttgcaaccg
gggcgcacactggcgctggtcggcgagtcgggcagtgggaaatccactgtaggccggtcc
atcctgcggctggtggagccgacatccggcgcggtgcagttcgatgggcaggatattctg
gcgctggatgcgccgggcctgcgcgcggcgcgagcaggcatgcagatgatctttcaggac
ccttatgccagcctcaacccgcagcgccgcgtggcagatcaggtggccgagccgctgtgg
aactacgcgcccatgccacgtcaagacacggaggcccgtgttgcagagctgtttgaccgg
gtgcaccttccgcgagaccttttgcagcgctatccgcatgagctttccggagggcaacgt
caacgggtcgcgattgcacgtgccttggcgttgaaccccaagctgattgtggcggatgag
gccgtcagtgccctggatgtcagtgtgcaggctgaaatcctgagcctttttcgggacttg
caggcggatatggggctgtcctatctcttcatcagtcacgacatggccgtggtggagcag
atgagccatgagattgcggtcatgtatctggggcgcatcgtcgagcgtggaccccgcgac
gcggtgctgcgcgatcctcgtcatagctataccaaagccttgttgagcgctgtgccggtc
ccggatccaaagcggcgcatcacagacgatgagttgaatttcaaaccaaatccctctcct
atacacaagatcggacatgatcccggcccttcgatttacgaagaggtgacaccggggcat
catgtgctgatctctgacagcggatatgactga
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