Roseovarius phycicola: RZ517_08850
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Entry
RZ517_08850 CDS
T10600
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rphc Roseovarius phycicola
Pathway
rphc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZ517_08850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphc02000
]
RZ517_08850
Transporters [BR:
rphc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RZ517_08850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WWR48262
LinkDB
All DBs
Position
complement(1737982..1739688)
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AA seq
568 aa
AA seq
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MVLGRNALWAGAVWCLASSAYADRASDGQLNLYYWQAPSILNPYLSGGSKDIEAASLILE
PLVRYDETGAMVPWLVDDIPTLENGGVSSDLTTVTWRLTEGLLWSDGSPLTSEDIKFTWE
YCTADGGGCAQFEKFGGITAIETPDAQTAVVRFEGPKPFPYSAFVGGLAPILQKAQFADC
LGPRAPECSAENFAPIGTGPFVVEDFRPNDVVQLSANPNYRDPDKPAFANVLIKGGGNAS
TAGSAVLETGEFDYGWNLQLSPEVLTRMEAAGKGQVVSAFGTVVERIVLNLTDPSSTLGN
ERSTTAHPHPFLYDPAVREALSLAIDRQLLVEIGYGSAGRVTCNVLPAPAIYVSTANDAC
MTQDIAAAQALLEAAGWIDSDGDGVRDKDGVALRLQFQTSTNAVRQDFQVLIKQWWAEIG
IDTQLRNIDASVFFGGDPGSPDTFQKFFADVQMFAGSFDGTDPEAYMSSWRCDKIPAPDN
QWQGSNISRFCSADYDMLADTMRRTGAMQERAALAKTMNDALVGAFVLLPLVDRGRVSAH
ANSLGGVRINTWDTELWNAADWVRKDGN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtacttggacgcaacgccctttgggccggggccgtttggtgtttggcctcctcagcc
tatgccgaccgggccagtgacggccagctcaatctctattattggcaagcgccatccatc
ttgaacccctacctgtcgggcggttccaaggatatcgaggccgccagcctgatccttgaa
cctctggtgcgctatgatgaaacgggcgcgatggtgccttggttggtggatgatatcccg
acactcgaaaacggtggtgtgtccagtgatctgactacggtcacctggcgcctcaccgaa
ggcctattgtggtcagatggaagccccctgacctcagaagacatcaagttcacatgggaa
tactgtacagccgacggcggcggatgcgcacaattcgagaaatttggtggcattactgcg
attgagacgccggatgcacagaccgcagtggtcaggtttgaaggccccaagcccttcccc
tactccgcctttgtcggcggcttggcccccatcctgcaaaaggcgcagtttgccgactgt
ctcggcccccgcgccccggaatgcagcgccgagaattttgcccccatcggcactggcccc
tttgtggtcgaggattttcgccccaatgacgtggtgcaactttcggccaacccaaattat
cgcgaccccgacaagccagcctttgccaacgtcctgatcaaagggggtggcaatgccagc
accgcaggaagcgcggtgctggaaacaggtgagtttgactatggttggaacctgcaactg
tcgccggaagttctgacgcgcatggaggccgccggaaagggccaggttgtctcggctttc
ggcacagttgtggagcggattgttctcaatctcaccgatccctcaagcacacttgggaat
gagcgctcaacaacggcccaccctcacccgtttttgtatgacccggcagtgcgcgaagcc
ctcagccttgccattgaccgccagcttctggtcgagatcggctacggatccgctggccga
gtcacctgcaacgtcctgccagcacccgcgatctatgtctccaccgccaatgacgcctgc
atgacgcaggatattgcagcggctcaggctttgcttgaggccgcaggctggatcgacagc
gatggcgacggggtgcgggacaaggatggcgtcgcgctgcgccttcagttccaaacctcg
accaatgccgtgcgccaggattttcaggttctgatcaagcaatggtgggccgagattggt
atcgacacacagttgcgcaacattgatgccagcgtctttttcggcggcgatcccggaagc
ccggatacatttcaaaagttctttgccgatgtgcagatgtttgccggaagcttcgatggc
accgatcccgaggcttatatgtcaagctggcgctgcgacaagatcccggcaccagacaac
caatggcaaggcagcaatatctcgcggttttgtagcgcagactatgacatgctcgccgac
acaatgcggcgcaccggtgccatgcaagagcgcgccgccttggccaaaaccatgaatgac
gctctggtcggcgcgtttgtcctgctgccgcttgtggatcgcggccgtgtctccgctcat
gccaattccctcggtggtgtgcggatcaacacctgggacacagagctttggaacgccgcc
gattgggtgcgcaaggacggcaactga
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