Roseovarius phycicola: RZ517_09280
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Entry
RZ517_09280 CDS
T10600
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
rphc Roseovarius phycicola
Pathway
rphc00860
Porphyrin metabolism
rphc01100
Metabolic pathways
rphc01110
Biosynthesis of secondary metabolites
rphc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RZ517_09280
Enzymes [BR:
rphc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
RZ517_09280
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GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WWR45019
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Position
1822104..1823084
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AA seq
326 aa
AA seq
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MDLDDLDWKLMNDWQRALPLVPRPFQVIADDLKTEESDVIRRLKSLLDVGAISRVGGTCR
PNTLAASTLAAVAAPPGYIEETAAIINSVEGVNHSYERENEWNIWFVATGPTRSFVDAAL
TQISVRTGLRVLDLRLIRPFNVDLGFALDGKGEMPAPLPVDDTVPLEAGDRAVMQALSEG
LEPVERPFAVLAQTLGREETEVLDRVRSLAQAGILSRIGLIVRHRPLGWRSNAMCVFEIP
EHEIYEKGAALTKVPGVTLCYERRPAPDVWPYTLYCMIHGRSRAETLDVLSLARVRATLT
GYPYKVLFSTRCFKQTGALIDRKENA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgacgatctggattggaagctgatgaacgactggcaacgcgccttgccgttg
gtgccgcgtccatttcaggtcattgccgatgacctcaagacagaggaaagcgatgttatc
cggcggctcaagtcgctgctggacgtcggcgcaatcagccgggttggcggtacgtgtcgg
cccaacacactcgcggcaagtacgctggccgctgtagccgcgcctccggggtacatcgaa
gagaccgccgcgatcatcaactcggtggaaggtgtgaaccattcgtatgagcgtgaaaat
gaatggaacatctggttcgtggccaccggtcctacacgcagttttgtcgatgcggccctg
acccagatttcggtccgcacgggtttgcgcgttctcgatttgcgtctgatccgcccattc
aatgtcgatcttggttttgctctggatggcaaaggcgagatgcccgcgccgctgccggtg
gatgatacggttccgcttgaagctggtgatcgcgcggtgatgcaggcgctgtccgaagga
ttggaaccagttgagcgaccctttgccgttttggcccaaacactgggacgcgaagagaca
gaggtgcttgaccgtgttcggtcgcttgcgcaggcaggcatcctaagccggattggcctg
attgtgcgccaccgaccattaggctggcggtcaaatgcgatgtgcgtcttcgaaattccc
gagcatgagatctacgagaagggcgccgctcttaccaaagtccccggcgtgacgctttgc
tatgaacgcaggcccgcacccgatgtttggccctacacgctttattgtatgatccatggc
cgcagccgggccgaaacactcgatgttttgtcattggcacgagtgcgcgccacgttgacc
ggctacccctacaaagttctcttcagcacccggtgcttcaaacaaacaggcgcgctgatc
gacaggaaggaaaacgcatga
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