Roseovarius phycicola: RZ517_09885
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Entry
RZ517_09885 CDS
T10600
Name
(GenBank) AraC family transcriptional regulator
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphc03000
]
RZ517_09885
Transcription factors [BR:
rphc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RZ517_09885
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
AraC_binding_2
HTH_Tnp_1
Cupin_6
Motif
Other DBs
NCBI-ProteinID:
WWR45127
UniProt:
A0ABZ2HDG4
LinkDB
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Position
complement(1942778..1943617)
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AA seq
279 aa
AA seq
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MPGTLQRFQIMMDPTNTRHAQLKTLAQWVGSAPWRATLPHSRDTHALIWITRGQGRCLLG
GRRCGLSVHSAVIIPAHTLFALEPGAQSFGLVCDIPTKSSILMPDEPMVLRIRDPRAQAE
LTTLMETMQRDQNEARPFWDEALNAHASLITVWLRRAIIAQDDAVLPRETASDRLLSAYA
ALIERDYATGRAMQDYARRLGVTPTHLTRTCKSAIGMTASDLLTRRILYGARDLLETTEL
PANQIAARLGFRSAAYFTRFVQRHTGKSPTELRFKLAKV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggacattgcagcggttccaaatcatgatggacccaaccaacacacggcacgcg
caactcaaaaccctggcacaatgggtcgggagcgcaccttggcgcgccaccctacctcat
tcgcgggacacccatgcgttgatttggatcacacgcggtcaaggacggtgccttttgggt
ggacggcggtgcgggctgagtgtgcattccgctgtgatcattcctgcgcacacgcttttt
gcgctggaaccgggggcgcaaagctttgggcttgtctgtgatatccccaccaaaagctcg
atactgatgccggacgaaccgatggtgctgcgcatccgagaccctcgcgctcaggcagaa
ctgaccacgctcatggaaaccatgcagcgcgaccagaatgaggcgcgtcccttttgggac
gaagcgctcaatgcccatgccagcctcatcaccgtctggctgcgccgtgcgattatcgcg
caggatgatgccgtccttccccgcgaaaccgcctcggaccggttgttgagcgcatatgcc
gcactgattgaacgcgactatgcaactggccgcgccatgcaggattatgcacgccgtttg
ggtgtcactccaacacatctcacacgcacctgcaaaagcgccattggcatgactgcttct
gatctattgacccggcgcattctgtatggcgcacgtgatctgcttgaaaccactgaactt
cccgccaatcagatcgccgcgcgcctggggtttcgcagtgccgcttatttcacacgcttt
gtccaacgtcatacgggcaagtcgccgacagagctgcgctttaaactggcgaaagtctga
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