KEGG   Roseovarius phycicola: RZ517_10430
Entry
RZ517_10430       CDS       T10600                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rphc  Roseovarius phycicola
Pathway
rphc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rphc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RZ517_10430
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rphc02022]
    RZ517_10430
Two-component system [BR:rphc02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   RZ517_10430
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 cREC_REC FleQ AAA_2 AAA_16 VpsR AAA M-inducer_phosp
Other DBs
NCBI-ProteinID: WWR45228
LinkDB
Position
complement(2051990..2053396)
AA seq 468 aa
MSDILIVDDERDIRELISDILKDEGFTTRLAGNSDEAMAAVAEERPGLMILDIWLKDSNM
DGIDILKCIKRDYPEVPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVIRRSME
TSRLRRENLALKQQSSGPAEMLGESPAFRTLISQLDKVTKSNGRVMLTGPAGSGKELAAR
YIHANSNRADGPFVCVGCASIEPDRMEEVLFGRESEEGGTAPGLLEEANGGVIYFDEVAD
MPLGTQSKILRVLVDQTFLRVGGSDKVQVDLRVISSTNRNLEAEIEADRFRRELYHRLNV
VPIDVPSLEDRREDVPDLAAYFIEALSREQGLPLRELSSEASALLQTMSWPGNIRQLRNV
VERILILGEATGDIEAREIPGESEGPAEDGRVVLSGTIATLPLREAREAFEREYLMTQIS
RFGGNISRTAEFVGMERSALHRKLKSLGVVTGAKGAKQTEEEPEPAEP
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgagcgatattctgattgtggacgacgagcgcgacatccgcgaactcatctccgatatt
ctgaaagatgaagggtttaccacgcgattggctggaaattcggacgaagccatggctgcc
gtggccgaagaacgacccgggctgatgatcctcgacatctggctgaaagacagcaacatg
gatggaatcgacatcctgaaatgcatcaagcgcgactacccggaagtgccggtggtgatc
atctcggggcacggcaatatcgagattgccgtcgccgcgatcaaacaaggcgcgtatgat
ttcattgaaaagcccttcaacattgatcagctgatggtcgtgatccggcgtagcatggaa
accagccgtctgcgtcgtgagaaccttgcgctcaaacagcaaagcagcggaccggccgaa
atgctgggcgagagccccgcgttccggacgttgatcagccaactcgacaaggtgaccaag
tccaatgggcgcgtgatgctgacaggtcccgcgggcagtggaaaggaactggctgcgcgt
tatatccatgccaattcaaatcgtgccgacgggccgtttgtttgcgtgggatgcgcttcg
attgaaccggaccgcatggaggaagtgctttttggacgcgaaagcgaagaagggggcaca
gcgcctggccttttggaagaggccaatggcggtgtgatctattttgacgaagtggcggat
atgccattgggaactcagtcaaaaatcctgcgtgttctggtggatcaaacattcctgagg
gttgggggcagcgacaaggtgcaggtggatttgcgggtgatttcctcaaccaaccgcaat
cttgaggccgagattgaggcggaccggttccgccgcgagctttatcatcgtctcaatgtg
gtgccgattgacgtgccaagtctggaagatcggcgcgaggatgtgccggacctggcggcc
tacttcatcgaagcgctgagccgcgagcagggcctgccacttcgggagttaagcagcgag
gcctcggcgcttttgcaaaccatgagctggccgggcaacattcgccagctgcgcaacgta
gtggagcgcattttgatccttggtgaagccacgggtgacattgaggcgcgagaaatccct
ggtgaaagcgaaggtccggcggaggatgggcgcgtggttttgtcaggtaccatcgccacc
ttaccgttgcgcgaggcgcgtgaggcctttgagcgtgaataccttatgacacaaatcagc
cgttttggcggcaatatcagccgcacggcggaattcgtcgggatggaacgcagcgcgttg
caccgtaaactgaagtcgctgggtgtggtcacaggagccaaaggggctaagcaaactgaa
gaagagcctgagcctgcagagccttaa

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