Roseovarius phycicola: RZ517_11475
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Entry
RZ517_11475 CDS
T10600
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphc02000
]
RZ517_11475 (lptD)
Transporters [BR:
rphc02000
]
Other transporters
Pores ion channels [TC:
1
]
RZ517_11475 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
Motif
Other DBs
NCBI-ProteinID:
WWR45421
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All DBs
Position
2260968..2263175
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AA seq
735 aa
AA seq
DB search
MTLRAFICFFVVLLSVSAHGASAQSETRATGVEKADPAILVADDVYLDGSEQLVATGNVE
ALYNGRRLYASEVIYDRTEERLIITGPIRIEEPDGQFFVLANSAALDREMNNGILRGARI
VMDDQIQLAANEIARVNGRYNQLYKAAVTSCRVCKTGRPPLWQIRARRVVHDQQEKQLYF
DDAQLRVLDTPILYLPRLRLPDPTLERSTGFLVPSIHNTSLLGFGVRVPYFIKIGDHKDL
TLTPYLATETRTLEWRYRQAFYNGKIEFNGAFSDDDIGTDDSRAYVFAEGTFYLPRDFVL
RFDIEAVSDDTYLLDYDYSQKDRLDSELEIERARRDEYIRGAITVFQTLRDGESNETLPT
GVINGEYERRIPLTNALGGELRLGFEGHGHFRNSSLNTDGPDFDPFADGRDVARLTFSAD
WRRGWTLPAGVLAELKLGLSADFFRIQDAGVTSSSEESELTPEAAIQLRWPLVKTTQAGS
THIIEPVVQIAWVGGRNPFVPNDESTQIEFDEGNLFATSRFTAPDRRERGFSAAYGLSWS
RYGVDGWQTSFAVGQVIRDELQTDPAGGAAFTNSSGLQDRYSDLLVAGQVKTVNGLTFTA
RGLFDEDLSTTKAEARASLINKVAQIGATYIWLRNDPAENRPGNVSEWAFDANYRISKHW
SGQADWRYDVASDEPVRAGLGITYANECVDVTLSASRRFTSSTILEPTTDISLTVGLRGF
TTKTRDKSYVRTCKN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttcgcgccttcatatgctttttcgttgtcctgttgtcggtttcggcccatggc
gcgtctgcgcaatctgaaacccgtgcaactggagtcgaaaaagccgatcctgcaatttta
gtcgccgatgatgtctatcttgatggcagcgagcaactggtcgcgactggaaatgtcgaa
gcgctttacaatgggcgtaggctttatgcgagcgaggttatctatgaccgcaccgaagag
cggctgatcatcaccggtccgattcgcatcgaagaaccggacggacagtttttcgtgctc
gccaacagcgccgcgttagatcgcgaaatgaacaacggcatcctgcgcggtgcgcgtatt
gtgatggacgaccagattcaattggcggccaatgagattgcgcgcgtaaacgggcgctac
aatcagctctacaaagcagccgtgacctcgtgtcgggtgtgcaaaactggacgtccgccg
ctttggcagatccgcgcgcgccgtgttgtgcatgatcaacaggaaaagcaactgtacttt
gatgatgctcagttgcgcgtgcttgatacgcctatcttgtacctaccacgcctgcgcttg
ccagaccccacgctggaacggtccaccggatttctcgtgccgtccatccacaacacatcg
ctcttgggctttggtgtgcgcgtgccctatttcatcaagataggtgaccataaggattta
acgctaacaccgtatctggcaacagaaacgcgaacgttagagtggcgataccgtcaggcc
ttctacaacggaaaaattgagttcaacggtgcattcagcgatgacgatataggcactgat
gacagccgggcttatgtctttgccgaaggaactttttacctcccgcgcgatttcgtcctg
cgctttgatatcgaagcagtcagcgacgatacctatttgctggactacgactactcccaa
aaagacaggctagacagcgaattggagatagagcgcgctcgcagggacgaatacattcgc
ggcgcgatcaccgttttccagactttacgtgatggcgaaagcaacgaaaccctgcctact
ggcgtgatcaatggcgagtatgagcgtcgtattccgctgacaaacgcgcttggtggcgag
ttaaggcttggctttgaagggcacgggcatttccgcaattcgagcctgaatacggatgga
cccgattttgacccattcgcagatggtcgcgacgtggcgcgcctgacgtttagcgcggac
tggcggcgcggttggacattgcctgctggcgttttggctgagcttaagcttggcttgtct
gcggatttctttcgcatccaggacgccggggtcaccagcagctctgaggagtcagagctg
acgcccgaggcggcgattcaattgcgttggcccttggtcaagaccacgcaagccgggtcg
acacatatcatcgaacctgtggttcaaatcgcatgggtcggcggtcgcaacccgtttgtc
cccaatgacgaaagcacccaaatcgagtttgatgaaggcaacctatttgccacgtctcgc
ttcaccgcaccggatagacgggaacgcggcttcagcgccgcgtatggattgagttggtcg
cgctacggcgttgacggatggcaaacgtcctttgctgtcggtcaggtcattcgcgacgaa
cttcagaccgaccccgctggcggggcagccttcaccaactcatcggggctgcaagaccgc
tattctgatcttctcgttgctgggcaagtcaaaactgtaaatggtttgactttcaccgcg
cgtggtctgtttgacgaagatctctcgaccaccaaggcagaggcgcgtgcaagtctgatc
aacaaagtggcgcaaatcggggcaacttacatctggttgcgcaacgaccctgcagaaaac
cgccctggcaacgtgtcagaatgggcgtttgacgcaaattatcgcatctccaaacactgg
tctggccaagccgattggcgctacgatgtcgccagcgacgagcctgtgcgcgcgggtctt
gggatcacgtatgcaaacgaatgcgttgacgtgacactttcggcctcgcgtcggttcacc
tcttccactatcctcgagccaacaactgatatcagccttactgtggggcttcgcggcttc
accaccaaaacacgcgacaaaagctacgtgcgaacatgcaaaaactga
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