Roseovarius phycicola: RZ517_11740
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Entry
RZ517_11740 CDS
T10600
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
rphc Roseovarius phycicola
Pathway
rphc02024
Quorum sensing
rphc03060
Protein export
rphc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RZ517_11740 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RZ517_11740 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZ517_11740 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rphc02044
]
RZ517_11740 (secD)
Secretion system [BR:
rphc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RZ517_11740 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
QcrA_N
Motif
Other DBs
NCBI-ProteinID:
WWR45470
UniProt:
A0ABZ2HCN7
LinkDB
All DBs
Position
complement(2313073..2315709)
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AA seq
878 aa
AA seq
DB search
MLQIDLWKRVVIWGLVALGLLLASPNGFYTKVETHNDAMVALEQGATGAELEAQAASWPS
WMPSGLVNLGLDLRGGAHLLAEVQVEDVYQARIEAMWPEIRDLLREERSRVGPIRLQPTD
AAELRVRLVEKPEEIEYAAGLVRGLAQPIFDPLSGVSSSDIDVAAAGDTIVVTLSEAERQ
ASDEQTVRTAREIIERRINEMGTREPTIQRQGADRILIQVPGVGSAAELKEIIGTTAQLT
FQPVVGRTGNPNDPPGAGNEILPSLDEEGVFYIVERAAVVTGEELVDAQPDFDQNGLPAV
SFRFNPAGGRKFGDYTAANIGSPFAIVLDNEVISAPVIQSHIPGGTGIITGRFTVEDSTN
LAVLLRAGALPAELEFLEERTVGPELGADSIEAGKIASIVAFGLVLAFMWASYGLFGLFA
NIALLINVGLIFGLLSLIGATLTLPGIAGIVLTIGMAVDANVLVFERIREELKTAKGPAR
AIELGYEKALSAITDANITTFITALILYAMGSGPVRGFAITLGLGIITSVFTAIFVTRLI
VIIWFERKRPKTVLQGRALRLVPKETSIDFFKRWKMSLGLSGVFIIVAVISFFLQGLNFG
IDFRGGTTIRTESAQTVDIGQYRDAITQLELGDVSITEIFDPTFGPDKNVAMIRIQAQEG
EEAVTPEVIRSVEAALQEVVPDLKFTAVDSVGPKVSGELIQTAVIAVLLAIAAVLVYIWL
RFEWQFAVGAVLALVHDVWLTIGIFSELQIQFDLAIIAALLTIVGYSLNDTVVVFDRVRE
NLRKYKKKDLSEVLNISINETLSRTVMTSVTTLLALMALYVLGGDVIRGFVFAMIWGVIV
GTYSSIFVASAVLLWLGVKRDWSKPDTTAGTQFANVDA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaattgacctctggaagcgcgtggtgatttggggcttggtggcgcttgggctg
ctgctggcctcgcccaatgggttctatacaaaggtcgagacgcataacgacgccatggtc
gccctcgaacagggcgcgacgggagcagagcttgaggcacaggcagccagctggccaagc
tggatgccatcaggccttgtcaatcttggacttgatctgcgcggtggcgcacaccttctg
gccgaggtgcaggtggaagatgtttatcaggcgcggatcgaggccatgtggccggaaata
cgggatttgttgcgcgaggaacgtagccgtgtcggccccattcgcttgcaacctacagat
gccgcagaactgcgcgtgcgactggtcgaaaagcctgaggaaattgaatatgccgcgggg
cttgtacgtggtctggcgcaaccaatcttcgacccgctttccggtgtatcctcaagcgat
atcgacgtcgcagctgcaggtgacacaatcgttgtcacgctgagcgaagccgagcggcaa
gccagtgacgagcaaaccgtgcgcaccgcgcgcgagattatcgaacgccgcatcaacgag
atgggcacgcgagagccgaccatccagcgccagggcgcggatcgtatccttattcaagtg
cccggcgtcggcagcgcggcagaactcaaagagatcatcggcactaccgctcagctgacg
tttcagcctgtcgtgggccggacgggcaaccccaatgaccctcccggtgcgggcaatgaa
atcctgccctcacttgatgaagagggtgtcttttacatcgtcgaacgcgccgcggtggtc
accggcgaagaactggtcgacgcgcagccggattttgaccaaaacggtctgcctgcagtc
tctttccgctttaacccggcgggtggccgcaaatttggtgactataccgccgccaatatt
ggcagcccctttgcgattgtgctcgacaacgaggtgatcagcgcgccggtgatccagagc
catattcccggcggcacgggtatcatcaccgggcggttcacggttgaggacagcaccaat
cttgccgtgcttctcagggcaggggccttgcctgcggaactggagtttctcgaagagcgc
accgtcgggccggaactgggggccgacagtattgaggcaggcaagatcgccagcattgtc
gccttcggcctcgtgctggcctttatgtgggcgagctatggcctctttggtctctttgcc
aacatcgcgcttctgatcaacgtgggtctgatctttggcttgctgagcctcattggcgcg
acgctgacgctgcccggtattgccgggatcgtgctgaccatcgggatggcggtggatgcc
aatgtgcttgtgtttgagcgcatacgcgaggaactcaaaaccgccaaaggcccggcgcgt
gccatcgagttgggctatgaaaaagcactcagcgccattaccgacgccaacatcaccacg
ttcattacggcgctgatcctctatgccatgggctctggccccgtgcgaggctttgccatc
acgctgggtctggggatcatcacgtcggtctttacggcgatcttcgtcacgcgcctgatc
gtgatcatctggtttgagcgcaaacgccccaagactgtgcttcagggccgcgccctgcgt
cttgtgccgaaagaaaccagcatcgatttcttcaagcgctggaaaatgtcactgggcctt
tcgggcgtgttcatcatcgtggcggtgatctcattcttcctgcaaggtctgaacttcggc
atcgatttccggggcggcaccacgatccggaccgaaagcgcgcaaaccgtcgatatcggc
caatatcgcgacgcgatcacacagctggagttaggcgatgtgtcgattaccgagattttt
gatccgacgttcggtccggataaaaatgtcgcgatgatccgtattcaggcacaggaaggc
gaagaagctgtcacgccggaagttatccgatccgtggaggcggcacttcaagaggtcgtc
cctgacctgaaattcactgcagtggatagcgttgggccaaaagtatccggcgaacttatt
caaaccgcggtcatcgccgtgctgctcgcgattgcggcggtgttggtctatatctggctc
aggtttgagtggcagtttgcggtgggcgcggtgcttgctcttgtgcatgatgtgtggctg
accataggcatattctcagagctgcaaattcagtttgacctcgccatcatcgccgccctt
ctgacgattgtgggttattcgctcaacgacacggtggtcgtttttgaccgggtgcgagag
aacctgcgcaagtacaagaaaaaagacctctccgaggtgctcaatatctcgatcaacgaa
acgctcagccggactgtcatgacctcggtcaccacgcttctggcgttgatggcactttac
gtgttgggaggcgacgtgatccggggctttgtctttgcgatgatatggggcgtgatcgtg
gggacctattcctcgatcttcgtggccagtgcggtgcttctctggttgggggtcaagcgc
gactggtccaaacccgataccaccgcaggcacgcagttcgccaacgtagatgcctga
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