Roseovarius phycicola: RZ517_11895
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Entry
RZ517_11895 CDS
T10600
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
Organism
rphc Roseovarius phycicola
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Motif
Pfam:
Peptidase_M23
LysM
LysM1_NFP_LYK
Biotin_lipoyl
CesT_Tir_1
Motif
Other DBs
NCBI-ProteinID:
WWR45500
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Position
2344069..2345217
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AA seq
382 aa
AA seq
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MSFRLHRVGTLTGCAALMVLTACSDLDFDLRGGASSTASAARQANTDRPAPDTRGIISYP
SYQVAVAQRGDTLRTVSQRIGVDVNALASYNGIDPDAPLRQNEIIALPTRVAEPEGGPIT
ASGVDITTLAGSAIDAADGANPRPGTLTPAGPGVEPIRHQVQRGETAFTIARLYNVSVRS
LADWNGLGADFDVREGQYLLIPVAVADTRTASVEATPLPTEPPGAGTPTPLPPSASEPLP
EQDTAPASQPVARTAAPDLSGETKKRETRMAFPVNGDIIREYAKGKNDGIDIAAPPGTPV
RAAADGTVAAITKDTNGIPIIVVKHDDNLLTVYSNVVKVKVDKDDRIKRGEQLAEIRADG
AAAVHFEVRKGFDSVDPIPFLQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcgcttacaccgcgtgggcacgctgaccggatgcgcagcattgatggttttg
acagcatgttctgacctggacttcgatctgcgtggcggcgcatcgagcactgcatcagcc
gcgcgccaggcaaacacggaccggcccgcgcctgacacccgcgggatcatttcctacccc
agctatcaggtggccgtcgcccagcgcggcgacaccctgcgcacagtgtcgcaacgcata
ggcgtcgatgtgaacgccttggccagctacaacggcatagatcccgacgcgcccttgcgc
cagaatgagatcatcgccctgcccacccgtgtcgcagaacccgaagggggcccgatcacg
gccagcggcgtggatatcaccacgctggccggatccgcaattgatgcagctgatggtgca
aacccaaggcccggcactctgaccccggcaggacccggtgttgagccgatccgccatcag
gtccagcgcggtgagacggcctttaccattgcacggctttacaatgtctcggtgcgcagc
cttgcagactggaacggtcttggagccgatttcgatgtgcgcgaaggacagtaccttctg
atcccagtcgccgttgccgacacccgcaccgcctcagttgaggccacaccgctgcccacc
gaaccgcccggagctggcacgccaacacccctgcccccaagcgcgtctgagccgttaccg
gaacaagacaccgcgcccgcgtcgcaacccgtcgcgcgcaccgccgcgcccgacctgagt
ggtgagaccaagaaacgcgaaacgcgcatggccttcccggtcaacggcgacatcattcga
gaatatgccaaaggcaagaatgacggcatcgacattgcagcccctccgggcacaccggtg
cgcgccgctgcggacggcaccgtggccgcgatcaccaaggacaccaacggtatcccgatc
atcgtggtcaaacatgacgacaacctgctgacggtctattccaacgtggtcaaagtgaag
gtcgacaaggacgaccgtatcaaacgtggtgaacagttggccgagatcagagctgacggc
gcagcggctgtgcatttcgaagtgcgcaaaggctttgacagcgtggatccaatcccgttt
ttgcagtga
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