KEGG   Roseovarius phycicola: RZ517_12880
Entry
RZ517_12880       CDS       T10600                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rphc  Roseovarius phycicola
Pathway
rphc00061  Fatty acid biosynthesis
rphc00071  Fatty acid degradation
rphc01100  Metabolic pathways
rphc01212  Fatty acid metabolism
rphc02024  Quorum sensing
rphc04146  Peroxisome
Module
rphc_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rphc00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RZ517_12880
   00071 Fatty acid degradation
    RZ517_12880
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RZ517_12880
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RZ517_12880
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rphc01004]
    RZ517_12880
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rphc04147]
    RZ517_12880
Enzymes [BR:rphc01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RZ517_12880
Lipid biosynthesis proteins [BR:rphc01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RZ517_12880
Exosome [BR:rphc04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RZ517_12880
  Exosomal proteins of breast cancer cells
   RZ517_12880
SSDB
Motif
Pfam: AMP-binding AMP-binding_C Prot_ATP_ID_OB_C
Other DBs
NCBI-ProteinID: WWR45681
LinkDB
Position
complement(2524996..2526465)
AA seq 489 aa
MNIAGWLEDQAKARGAAPAIFYGHDMVSDYVGFRDRAARMAGAFLARGLKPGDRVAIFMS
NHPDYLISLFGIWYAGLVAVPINARLHGKEAAWILDNAGAELCVSTGAQAEALHDAVDVV
DPSRLDSAPISDVAARASGDLAWLFYTSGTTGRPKGVQITHGMLQVMTESYLVSVDEVTP
DDTTLYAAPMSHGAGLYALVHVLKGARHVVQVSGGFDPEELLDLAVHYDRLHFFAAPTML
TRLTAWAQEAGRNGQGLRSVVLGGAPLYEVDLRAALAQFGPVFLQIYGQGEAPMGITALG
REDIVAGRKLTTVGQAQSGVSLRITNGSGAILKSGQIGEVEVRGDLVMPGYWQNPTATAE
TLRDGWLRTGDMGHLDDEGYLTLVDRSKDMIISGGQNIYPREVEEVLLAHPDVIEASVIG
RPSEQWGEEVVAFVVAHRKGLNEATLDAHCLANIARFKRPKAYVFVEDIPKNNYGKVLKT
ALRDRLSSD
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgaatattgcgggctggctggaagatcaggcaaaggcgcggggtgcggccccggcgatc
ttttatggacatgatatggtcagtgactatgtcgggtttcgtgatcgggcggcacgcatg
gccggggcatttttggcgcgaggcctgaaacctggtgatcgggtggcgatatttatgagc
aatcatcccgattacctcatttcgctcttcggcatctggtatgcggggctggtggcggta
ccgatcaatgcgcggctgcatggcaaagaggcggcttggattttggacaacgccggggct
gaactgtgtgtgtcgacgggcgcgcaggcggaggctctgcacgatgctgtggatgtggtt
gatcccagcaggcttgatagtgcgccaatctcggacgttgcagcgcgcgcttcaggtgat
ttagcctggctgttttacacctccggcacaacaggacgacccaaaggggtgcagatcacc
cacggtatgttgcaggtgatgaccgagagctatctggtctcggtcgatgaggtcacgccg
gacgataccacactttatgccgcgccgatgagccacggcgcggggctatatgcgttggtg
catgtgctcaaaggcgcgcggcatgtggtgcaggtgtctggcgggtttgatccggaggag
ctgcttgatctggcggtgcattatgacaggctgcacttctttgcggcgccaacgatgctc
actcgcctgacggcttgggcgcaagaggcgggacgcaatggccaagggttgcgcagcgtc
gtgctcgggggtgcaccgctctatgaggtggatttgcgcgccgcgcttgcgcagtttggg
cctgtgtttctgcaaatctacgggcagggtgaggcaccgatggggatcaccgcgcttggt
cgggaagatattgtggcggggcggaaacttaccacagtggggcaagctcagagcggcgtt
tctctcaggattacaaatggttctggcgcaatattgaagtccggtcagattggtgaggtt
gaggtgcgaggtgacctggtgatgccggggtattggcaaaaccccacggcaacggccgag
acgctgcgcgatgggtggttgcgcacgggcgatatggggcatctggatgatgaggggtat
ctgacgctggtggatcgttccaaggatatgatcatttctggcgggcagaatatctatcca
cgcgaggtagaggaggtgcttttggcccatcctgacgtcattgaggcctcggtgatcggg
cgtccctctgagcaatggggtgaagaggtggtggcctttgtcgtggcgcatagaaagggc
ttgaatgaggcgacgcttgatgcccattgccttgcaaatatcgcgcggttcaagcgaccc
aaggcctatgtttttgtcgaggatataccgaagaataactacgggaaagtgctcaaaacc
gcacttcgagaccgtctttcaagcgattga

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