Roseovarius phycicola: RZ517_12935
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Entry
RZ517_12935 CDS
T10600
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rphc Roseovarius phycicola
Pathway
rphc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RZ517_12935 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphc03019
]
RZ517_12935 (groL)
03110 Chaperones and folding catalysts [BR:
rphc03110
]
RZ517_12935 (groL)
03029 Mitochondrial biogenesis [BR:
rphc03029
]
RZ517_12935 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphc04147
]
RZ517_12935 (groL)
Enzymes [BR:
rphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RZ517_12935 (groL)
Messenger RNA biogenesis [BR:
rphc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RZ517_12935 (groL)
Chaperones and folding catalysts [BR:
rphc03110
]
Heat shock proteins
HSP60 / Chaperonin
RZ517_12935 (groL)
Mitochondrial biogenesis [BR:
rphc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RZ517_12935 (groL)
Exosome [BR:
rphc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RZ517_12935 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RZ517_12935 (groL)
Exosomal proteins of breast cancer cells
RZ517_12935 (groL)
Exosomal proteins of colorectal cancer cells
RZ517_12935 (groL)
Exosomal proteins of bladder cancer cells
RZ517_12935 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WWR45691
UniProt:
A0ABZ2HIB0
LinkDB
All DBs
Position
complement(2535600..2537243)
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKDVKFDTDARNKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKAVAAGMNPMDLKRGI
DLATSKVVESIKNASREVKDSEEVSQVGTISANGEAEIGQQIAGAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNADKMTAELEDCMILLHEKKLSSLQPMVPLLESV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLENVTMDMLGSAKKVQITKDETTVVDGAGEKAEIEARVSQIRGQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QAAKKLEGVEGANSDQNNGIAIVRKALEAPLRQIAENSGVDGSVVAGKIRESSDDSFGFN
AQTEEYGDMFKFGVIDPAKVVRTALEDAASIAGLLITTEAMVADKPAKEGAGAGGGMPDM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaggacgtgaaatttgatacagatgcccgcaacaaaatgctgcgcggcgtc
aacattctggccgatgcggtcaaagtgaccctcggccccaaaggccgcaacgtggttctg
gacaaatccttcggcgcaccgcgcatcaccaaagacggtgtgtcggttgccaaggaaatc
gagctggaagacaagttcgagaacatgggcgcgcaaatggtgaaagaagtcgccagccgc
accaatgacgaagccggtgacggcacgacaactgcgactgttctggcgcaagccatcgtt
aaagaaggcatgaaagccgtggccgcgggcatgaacccgatggaccttaagcgcggcatc
gacctggccacgtcgaaagtggttgagtcgatcaaaaacgcatctcgcgaagtcaaagac
agcgaagaagtctcgcaagtcggcaccatctcggccaacggtgaagctgaaatcggtcag
caaattgctggtgcgatgcaaaaggttggcaacgaaggtgtcatcactgttgaggaaaac
aaaggtctggaaaccgagaccgatgttgtcgaaggtatgcagtttgaccgtggctacctg
tcaccatacttcgtgaccaacgctgacaagatgacagcagaactcgaagactgcatgatc
ctgctgcacgagaagaaactctcgtcgctgcagccgatggtgccactccttgagtcggtc
attcagtcgcaaaagcctctgctgatcattgcggaagacgtggaaggcgaagcgctggca
accctcgtggtcaacaaacttcgcggcggcctgaaaatcgctgctgtcaaggcccctggt
ttcggcgaccgccgcaaagccatgctgcaggacatcgcgatcctgacaggtggtcaggtc
atctccgaagatctgggcatgaagcttgagaatgtcacaatggatatgctcggctcggcc
aagaaagtgcagatcaccaaggacgagacaaccgttgtcgacggtgctggcgagaaagcc
gaaatcgaagcccgggtatcccagatccgtggccagatcgaagaaaccacgtctgactac
gaccgtgaaaagctgcaagagcgtgttgcgaaactcgcaggcggcgtggctgttatccgc
gtgggcggcatgaccgaggtcgaagtgaaagagcgcaaagaccgtgtcgatgacgccctg
aacgcgacccgtgcggccgtgcaagaaggcatcgttgttggcggtggggtggctctggtt
caagccgccaagaagcttgaaggcgtcgaaggtgccaacagcgaccagaacaacggtatc
gcaatcgtgcgcaaggcacttgaagcacctctgcgtcagatcgccgagaactctggtgtg
gacggctccgtcgttgcgggcaagatccgcgaatccagcgacgactcgttcggcttcaat
gcgcaaaccgaggaatatggtgacatgttcaagttcggcgtgattgacccggccaaagtt
gtgcgcacagctctggaagacgcagcctcaatcgcgggtctgctgatcactactgaagcc
atggtcgccgacaagcctgccaaagagggcgctggcgctggtggcggcatgcccgacatg
ggcggcatgggcggcatgatgtaa
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