Roseovarius phycicola: RZ517_13500
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Entry
RZ517_13500 CDS
T10600
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rphc Roseovarius phycicola
Pathway
rphc00630
Glyoxylate and dicarboxylate metabolism
rphc00680
Methane metabolism
rphc01100
Metabolic pathways
rphc01120
Microbial metabolism in diverse environments
rphc01200
Carbon metabolism
Brite
Enzymes [BR:
rphc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RZ517_13500 (fdhF)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WWR45790
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Position
complement(2641260..2644025)
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AA seq
921 aa
AA seq
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MSDTVKFTLDGKEVTAEKGLTIWEVAHGRGLVIPHLCHKPAPGYRPDGNCRACMVEVEGE
RTLVASCIREAADGMVVTTNSARAETARKMVIEMLVTDQPERAEAHDKSSHLWDMAEMNG
VSDSRLPKLEKDRIPLLDDSHVAMSVNLDACIQCGLCVRACREVQVNDVIGMAGRGHDAY
PVFDQADPMGESTCVACGECVQACPTGALMPASVVDDAQIGDSKDYDHEVKSVCAFCGVG
CQISMKVKDGKIKYVEGINGPANEGRLCVKGRFGYDYIHHQHRLTKPLIRREDAPAKGLN
VNPDNWQDFFREASWDEALDVAAGGLKGRGREVAGFGSAKCTNEEAYLFQKFIRQGFGHN
NVDHCTRLCHASSVAALIENVGSGAVTAGFNDIKDADVAIVIGANPVENHPVAATYFKQF
TKRGGKLIVMDPRGVGLRRFATHMLQFKPGADVSMLNAIMHLIVEEGLYDQQYIEAFTEN
WEAEKEHLAQFAPEKMEELCGIPAETLRAVARDFATAKAGMIFWGMGISQHIHGTDNSRC
LISLALMCGHVGRPGTGLHPLRGQNNVQGASDAGLIPMFLPDYQSVTDDGVRSAFTDVWA
SGDFSNEKGLTVTEIMDAVHEGHIKAMYVLGENPAMSDPDVEHARDALAKLDHLVVQDIF
ITETANYADVILPASALYEKSGTVSNTNRTVQMLRPAVPPPGEAKEDWWIEVELAKRCGL
PWTYTHPSEVFAEMAVNMRSLDNITWDRLENEAVTYPSLSPEDPGQSVVFGDAFPRPEGR
ARFTPASVIPPDDLPDADFPMVLTTGRQLEHWHTGSMTRRATVLDAVEPEANCSLHPSTL
RQLGVEPGGMVRITTKRGSIEIMARADRAIAPDMVFVPFAYVEAAANILTNPAVDPYGKI
PEFKYSAVRVEAADASVVAAQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacagtcaaattcacactcgatggtaaagaagtcaccgccgagaagggtctc
accatttgggaagtggcgcatggtcggggtctcgtgatcccgcatctctgccacaaaccc
gcgccgggctatcgccccgatggcaactgccgggcttgtatggttgaggtggagggcgag
cgcacgctggtggcttcctgcatccgcgaagcggcggacgggatggtcgtgaccaccaat
tccgcgcgggcagaaactgcgcgcaagatggtgattgagatgctggtcaccgatcagccg
gagcgcgctgaggcgcatgacaaatcaagccacctgtgggatatggccgagatgaacggc
gtctcggacagccgtttgcccaagcttgagaaagaccgcattccactgctggatgacagc
catgtggcgatgagtgtgaacctcgatgcgtgcattcaatgtggcctttgcgtgcgcgct
tgccgcgaggtacaggtcaatgacgtgatcggcatggcgggccgggggcatgatgcttac
ccggtgtttgatcaggccgacccgatgggagaaagcacctgcgtggcttgtggcgaatgc
gtgcaggcctgcccgaccggcgcgctgatgccagcctctgtggtggatgatgcgcagatc
ggggacagcaaggactatgaccacgaggtcaaaagtgtctgtgccttctgcggtgtgggt
tgtcagatcagcatgaaggtcaaagacggcaagatcaaatatgtcgagggcataaatggg
cctgcaaacgaggggcgtctctgtgtcaaagggcggtttggatatgactatatccaccac
cagcaccgtctcaccaaacctctgatccggcgtgaggatgcgcctgccaaagggctcaac
gtgaacccggataactggcaggacttcttccgcgaagcgtcatgggatgaagcactggat
gtcgcggcgggcggtctgaagggacgcggtcgtgaggtggcgggcttcggcagtgcgaaa
tgcaccaatgaagaggcgtatcttttccagaagtttatccgtcagggctttggccataat
aacgtcgaccattgcacgcggctgtgtcatgcctcctctgtggccgctctcattgagaat
gtcggctctggcgctgtgacggctgggttcaatgacatcaaggacgcggatgtggcgatt
gtcatcggggccaacccggtggagaaccaccctgttgcggcgacctatttcaagcagttc
accaaacgcggtggtaagctcattgtgatggacccgcgcggcgttggcctgcgacggttc
gccacgcatatgctgcagttcaaacccggggccgatgtctccatgctcaacgcgatcatg
catctgatcgtcgaagaggggctctacgatcagcaatatatcgaagccttcaccgaaaac
tgggaggccgagaaagagcatctggcgcaattcgcacctgagaagatggaagagctttgc
ggtattccggcggagactttgcgggcggtcgcccgtgattttgcgacggccaaggccggc
atgatcttctggggcatgggcattagccagcatattcatggcacagacaattcgcgctgc
ctgatctcactggcactgatgtgtggccatgtgggccgtccgggcacaggtctgcatccg
ctgcgcggacagaacaacgtgcaaggggcgtctgatgccgggcttattccgatgttcctg
ccggattatcagtcggtgaccgatgatggtgtgcgctctgcctttacggatgtgtgggcc
tcgggtgatttcagcaatgaaaaaggcctcaccgtgactgagatcatggatgcggtgcat
gagggtcacatcaaggcgatgtacgtgctgggcgaaaacccggccatgtctgaccctgac
gtggaacatgcacgggatgcattggccaagctcgatcatctggtggtgcaggatattttc
ataaccgagacggccaactatgcggacgtcatcctgccagcatcggctttgtatgaaaag
tcaggaactgtctcaaacaccaaccggactgttcagatgctgcggcccgctgtgcccccg
cccggagaggcgaaagaggattggtggattgaggtcgaactggccaagcgctgcggtttg
ccctggacgtacacgcacccgtctgaggtctttgccgagatggcggtgaatatgcgcagt
ctcgacaacatcacttgggaccggcttgagaacgaggcggtcacttacccgtcgctctca
ccagaagaccctggccagtcggttgtgtttggcgacgccttcccacgcccagaggggagg
gcacgcttcacacctgcgtctgtgattccgccagatgacctgccggatgctgatttcccg
atggtgctgaccactgggcggcagttggagcattggcataccgggtcgatgacgcgccgt
gccacggttttggatgcggtggagcctgaggccaactgttcgctgcacccctcgactttg
cgccagcttggggtggagcctggcggcatggtgcggatcaccaccaagcgcggctcgatt
gagatcatggcgcgggcggatcgtgcgattgcaccagatatggtctttgtgccctttgcc
tatgtcgaggcggcggcgaacattttgaccaacccggcggttgacccctatggcaagatc
cccgagttcaaatattccgccgtacgggttgaggcggcggatgcaagcgttgttgcagcg
caataa
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