Roseovarius phycicola: RZ517_13630
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Entry
RZ517_13630 CDS
T10600
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
rphc Roseovarius phycicola
Pathway
rphc00730
Thiamine metabolism
rphc00900
Terpenoid backbone biosynthesis
rphc01100
Metabolic pathways
rphc01110
Biosynthesis of secondary metabolites
Module
rphc_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RZ517_13630 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RZ517_13630 (dxs)
Enzymes [BR:
rphc01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
RZ517_13630 (dxs)
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
WWR45815
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Position
complement(2672176..2674104)
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AA seq
642 aa
AA seq
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MPKDTPTTPLLDRVAGPSDLRQLPDSDLAEIARELRAEVISAVSETGGHLGSSLGVVELA
VAIHAVFNTPMDKLVWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRAESEYDPFGA
AHSSTSISAALGFTVGRDMGRPTGDAIAVIGDGSISAGMAYEAMNNAGAEGRRMFVILND
NEMSIAPPVGAMSSYLSGLYANEPLAKMKSLAEGFEAALPAPMREGAKRARQLVTGVSES
GTLFEELGFEYVGPINGHDMDQLLPVLRAAHTRATGPVLIHVCTVKGKGYTPAEASADCY
HGVSKFDVETGAQAKKSASAPSYTSVFGQALTQEAARDPNVVAVTAAMPSGTGVNIMAER
FPNRVFDVGIAEQHAVTFAAGMAASGLRPFCAIYSTFLQRGYDQVVHDVALQGLPVRFAI
DRAGLVGADGPTHAGAFDIGYLGALPGMTCMAAADEAELTHMVATAAAHDEGPIAFRYPR
GAGTGVQLPERGEILEIGKGRVLFEGTDVAILSYGAHLTECLEAAEILENAGLSVTLADA
RFAKPLDRELVLQLASHHRALITVEEGAMCGFGAIVLQTLAAEGALDRGLAIRTMHLPDR
YIDQASPDEMYEAAGLTARDIALTATQAAGSTADVVPFGVVK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagatacaccaacaacaccgcttctggaccgggtcgctggcccgtccgacctg
cgtcaactgccggacagtgatctggccgaaattgcacgcgaactgcgcgccgaggtgatt
tccgccgtttccgagactggcgggcatctgggatcatctttgggcgttgtcgaactggcc
gttgccattcatgcggtgttcaacacgccgatggacaagcttgtctgggatgtggggcat
cagtgctacccccataaaattctcaccgggcggcgggatcgcattcgtaccctgcgtcag
aaggatgggctgagcgggttcaccaagcgcgcggagagtgaatacgacccctttggtgcg
gctcatagttccacctcgatcagtgctgcacttgggtttacggtcgggcgcgacatggga
cggcctacgggcgatgcaattgccgtgattggcgatggatcgatcagtgcgggcatggcc
tatgaggcgatgaacaatgcgggcgccgaagggcggcggatgttcgtcattctcaatgac
aatgagatgagcattgcgcctcctgttggcgcgatgtcatcctacctttctggcctttat
gccaatgagccgctggccaagatgaagagcctggccgaggggtttgaagcggccctgcct
gcgccgatgcgcgaaggggcgaagcgcgcgcggcagcttgtgacgggggtctcggaatcg
ggcacgctttttgaagagcttgggtttgaatatgtcgggccgattaatggccacgacatg
gatcaactcttgcccgtgctgcgcgcagcgcacacgcgggccaccgggccggttctgatc
catgtttgcacggtcaagggcaagggatataccccggcggaggccagcgcggattgttat
catggtgtctccaagtttgacgtggaaaccggggcgcaggccaagaaatcggcgtccgcg
ccgtcctacacctcggtctttggccaggcgttgacgcaagaagccgcgagagatcccaac
gttgtggcggtcactgcggcgatgccttcgggtactggcgtcaacatcatggccgagcgg
tttccgaaccgggtgtttgatgttggcatcgccgaacaacatgctgtgacgtttgcggcg
gggatggcggccagcggattgcggccgttctgcgcgatttactcgacgttcctgcaacgc
ggctatgatcaggtggtgcatgatgtggctttgcaaggcctgccggtgcggtttgcgatt
gaccgggcggggcttgtgggggccgatgggccgacacatgcaggggcatttgatatcggg
tatctgggcgctttgcccggcatgacctgtatggcggcggctgatgaagcagagctgacg
catatggtggccacggcggcggcgcatgacgaggggccgattgcgtttcggtatccgcgt
ggggcagggacgggcgtgcaattgcctgagcgtggcgagattctagagattggcaagggt
cgggtgctctttgaaggcactgacgttgcgatcctgtcttacggtgcacatctgaccgag
tgcctggaagcggcggagatactggagaatgcggggctgtccgtcactttggctgatgcc
cggtttgccaagcctctggatcgtgagctggtgctgcaactggcaagccatcaccgggcg
ctgatcacagtggaagaaggcgcgatgtgcggctttggggccatcgtgctgcaaacgctc
gctgccgagggcgcgttggatcgtggtcttgccattcgtacgatgcatcttccggatcgc
tacattgatcaagccagccccgatgagatgtatgaagcggcaggtctgacggcacgagac
attgcactcacggcgacacaagccgcagggtcaactgcggatgtcgtgccgtttggggtt
gtcaaatag
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