Roseovarius phycicola: RZ517_16225
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Entry
RZ517_16225 CDS
T10600
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RZ517_16225 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphc03019
]
RZ517_16225 (rnc)
03009 Ribosome biogenesis [BR:
rphc03009
]
RZ517_16225 (rnc)
03036 Chromosome and associated proteins [BR:
rphc03036
]
RZ517_16225 (rnc)
Enzymes [BR:
rphc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RZ517_16225 (rnc)
Messenger RNA biogenesis [BR:
rphc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RZ517_16225 (rnc)
Ribosome biogenesis [BR:
rphc03009
]
Eukaryotic type
90S particles
RNase
RZ517_16225 (rnc)
Prokaryotic type
rRNA processing factors
RZ517_16225 (rnc)
Chromosome and associated proteins [BR:
rphc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RZ517_16225 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WWR46297
UniProt:
A0ABZ2HGB2
LinkDB
All DBs
Position
complement(3190807..3191490)
Genome browser
AA seq
227 aa
AA seq
DB search
MKLSAELKAFEARLGHEFQRPELLVRAVTHGSMTTVNREDNQRLEFLGDRVLGLVMAEAL
LDDDGDAAEGQLAPRYNALVRKEACADVAKEIDLGAVLKLGRSEMLSGGRRKQALLGDAM
EAVIAAVYRDAGFEAAKALVLRLWGSRIKTVEADARDPKTALQEWAQARGFAPPDYVEQA
RSGPDHAPQFTIEARLDNGEAERATAGSKRQAEQLAAKALLTRLQKL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctcggccgagctgaaggcgtttgaggcgcggcttggtcatgagtttcagcgg
cccgagcttctggttcgcgctgtgactcatggctcgatgacgacggtcaatcgcgaagac
aatcaacgacttgagtttctgggtgacagagtgctgggtcttgtgatggcagaggccctg
ctggatgatgacggtgacgccgccgaagggcagcttgcgccacgctataacgccctggtg
cgcaaagaggcctgtgcggatgttgccaaggagattgatcttggtgctgtgttgaaactg
gggcggtcagagatgctctcgggcgggcgacgcaagcaagcgctcttaggagacgcgatg
gaagcggtgatcgccgctgtgtatcgcgatgccgggtttgaagcagccaaggcccttgtg
ctgcggctttggggctcacggatcaaaaccgttgaggcggatgcgcgtgatccaaagacc
gcactgcaggaatgggctcaggcgcggggttttgcgccgcctgactacgttgagcaggcg
cgcagtggtcccgatcacgcgccgcagttcaccatcgaggcgcggctggacaacggcgag
gccgagcgtgcgacggcggggtctaagcgtcaggcggaacagcttgccgccaaggcgttg
ctgacacggcttcagaagctctga
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