Roseovarius phycicola: RZ517_16295
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Entry
RZ517_16295 CDS
T10600
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphc02000
]
RZ517_16295
Transporters [BR:
rphc02000
]
Other transporters
Pores ion channels [TC:
1
]
RZ517_16295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
LysC
Motif
Other DBs
NCBI-ProteinID:
WWR46311
UniProt:
A0ABZ2HIF8
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All DBs
Position
complement(3202303..3204153)
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AA seq
616 aa
AA seq
DB search
MSAIEENSRNAVRDTLDENGMVWTEVDADGLQVYLAGTAPSEATRFRALSIAGSVVESAR
IIDQMLVEDTAGIEPPRFSVEILRNDSGISLIGLIPASMDRDDLLFDVARRTGDQEITDL
LETADYPEPETWQDALDYAVRSLDDLERAKISVDASRVEVTAMAESEQDKTTLETDLARR
LPDGVRLALDISAPRPVVTPFTLRYTIEDGTGKFDVCAADTETARERILRAAGRNGLDYK
AQCTLALGVPSPKWADAAELAIDALGEIGNGSITFSDADVSLVAAYGTSESVFDAVVGRL
ETSLPDVFALHAVLPVPETENAQAPEFVATLSPEGLVQIRGRVENERARETVDSLAKARF
ASDAVYTTARVAENLPRDWTVRTLTALEALAYLSNGAVTVTPDAIDVAGQTGNKEAEATI
TGMLAQKLGDAERYTIDVSYQEALDPIASLPTPDECEAQIAQIQVERKITFAPSETTIDD
IGAAIMDDIAEVVKSCGEIRMEIGGHTDSQGREVMNEQLSQARAQTILNELRSRQVLTAS
ISAKGYGESKPIADNDSEEGREANRRIEFRVIRPEPIKEEQTTLEAMEEEVQNKAQGEDV
GASPEEPEPEAESAAE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccatagaagagaattcgcgcaatgcggtgcgcgatacgctcgatgaaaacggt
atggtctggacggaggtcgatgccgatggcttgcaggtctatcttgcagggactgccccg
tccgaggcgacgcgctttcgggccctctcgatagccggaagtgtcgtggaatccgcccgg
atcatcgaccagatgctggtcgaggacactgcaggtatcgaaccaccgcgcttttccgtg
gaaattttgagaaatgacagcggcatctcattgatcgggttgatccctgcttcgatggat
cgtgatgacctgctctttgatgtggcgcgacgcaccggggatcaggagatcaccgacctt
ttggagacagcggactatccagaacccgagacttggcaggatgcgctcgattatgcggtt
cggtcattggatgatctggaacgggccaagatttcagtggatgcctcgcgggtcgaagtc
acggctatggcggagagtgaacaagataaaacaacgctggaaactgatctggcgcggcgc
ttgcctgatggggtgcggttggcgctcgatatctccgcgccgaggcctgtcgtgacgccc
tttaccctgcgttataccatagaagacggcaccggtaaatttgatgtgtgcgctgccgat
acagagaccgcacgcgagcggattctgcgcgcagcagggcgcaatggcctcgactataaa
gcgcagtgcactttggcgcttggtgtgccatcgcccaagtgggccgatgccgcagagcta
gcgatcgatgcgctgggtgagattggcaatggcagcatcacgttctcggacgcggatgtc
tcgctggtggcggcatatggcacatcggaatcggtgtttgatgcggtggttggacggctg
gaaacatcattgccggacgtgtttgcacttcacgctgttctgccggttccagagacggaa
aatgcgcaggcacctgaatttgttgcgacgctttcgcctgaagggctggtgcagatcaga
gggcgtgtggaaaacgagcgcgcgcgagagacggtcgacagccttgcgaaggcgcggttc
gcctcagacgcggtctacactacggcacgcgtggccgaaaacttgccgcgcgattggact
gtacgcacgttgactgcgttggaggcactggcctatctgtcgaatggggctgtcaccgtg
acgcccgatgccatcgatgtcgccggccaaaccgggaacaaggaggcggaggccacgatc
acagggatgctggcgcaaaagctgggcgatgctgagcgatacacaattgacgtgtcctat
caggaagcgcttgacccgattgcaagcctgcccaccccggatgagtgcgaggcacagatt
gcgcagattcaggtggagcggaaaatcaccttcgcccctagtgaaaccacgattgatgat
attggtgcggcgatcatggatgacatcgcggaggtcgttaaatcctgtggcgagatccgc
atggaaattggcgggcacacggacagccagggccgtgaggtcatgaacgaacagctgagt
caggcccgggcgcaaaccatcctcaatgagcttcggtcgcgtcaggttttgaccgcgtcg
atttcggcaaagggttacggtgagagcaagccgattgcggataacgattctgaagaaggg
cgcgaagccaatcggcgcattgagtttcgggtgatccgtccagaacccatcaaggaagag
cagacaacgcttgaagcgatggaagaagaggttcaaaacaaagctcagggtgaagatgta
ggtgcatcccccgaagaaccggaaccagaagcggaaagcgctgcggaatga
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