Roseovarius phycicola: RZ517_16580
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Entry
RZ517_16580 CDS
T10600
Name
(GenBank) FCD domain-containing protein
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
rphc Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphc03000
]
RZ517_16580
Transcription factors [BR:
rphc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RZ517_16580
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_Crp_2
HTH_11
Rrf2
MarR
Fe_dep_repress
HTH_IclR
HTH_36
TrmB
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
WWR46365
LinkDB
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Position
3260453..3261220
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AA seq
255 aa
AA seq
DB search
MPFKKVTPEKLSSAVTAQIEKLILRGILRPGERLPAERELAERLGVSRPSLREAVADLQD
KGLLTSKAGSGIFVADVLGNAFSDALIGLFASHDEAVFDYIAFRRDMEGLAAERAARLAS
DTDLKVIDAIHAKMEKAHAKSDPETEAKLDADFHMAILDASHNVIMLHMMRSMFQLLQSG
VFYNRKIMFQQGNRRKTLLDQHGAINAALQARDPGAAREAVMSHLTYVETCLANQRKSDA
NEAIAQQRLEHEQSK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccatttaaaaaagtcactccagaaaaactgtcctctgcggtcacagcccagatcgaa
aaactgatcctgcgcggcattttgcgacccggagaacgtcttccggcagaacgcgaactg
gccgagcgactgggtgtgtcacgtccgtcccttcgcgaagcggtagctgaccttcaagat
aaggggcttctgaccagcaaggcaggatccggtatctttgttgcagatgttttgggcaac
gccttttcagatgcgctcatcgggctttttgcatcgcatgatgaggcagtgtttgactac
attgcgtttcgcagggacatggaagggctggccgccgaacgcgcggcacgactggcatcg
gatacagacctcaaggtgatcgacgcaatccacgcaaaaatggaaaaggcgcacgccaaa
tccgatccagagacggaagccaagctcgatgcggattttcacatggccattctggacgca
agccataacgtgatcatgttgcatatgatgcgatcaatgttccaactgctgcaaagcggc
gtgttttacaatcgtaagatcatgttccagcaaggcaatcgccgaaaaactcttctggat
caacatggtgccatcaatgcagccctgcaagcccgtgatccgggcgcggcgcgtgaggct
gtgatgtcacaccttacctatgttgagacctgtctggccaatcaacgaaagtccgatgcc
aatgaagcgattgctcaacagcggctggaacatgagcaatccaaatag
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