Roseovarius phycicola: RZ517_17005
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Entry
RZ517_17005 CDS
T10600
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rphc Roseovarius phycicola
Pathway
rphc00541
Biosynthesis of various nucleotide sugars
rphc01100
Metabolic pathways
rphc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RZ517_17005 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rphc01005
]
RZ517_17005 (kdsA)
Enzymes [BR:
rphc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RZ517_17005 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rphc01005
]
Lipid A
RZ517_17005 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WWR46444
UniProt:
A0ABZ2HHW3
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All DBs
Position
3343828..3344661
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AA seq
277 aa
AA seq
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MKTINISGLRVGNDQPLTLIAGPCQMESREHALMIAREMKSACDAAGAQYIFKASFDKAN
RTSLSGKRGVGLQEGLDILQTVKDDVGVPVLTDIHLPEQCAPVAKVVDVLQIPAFLCRQT
DLLLAAGETGAAINVKKGQFLAPWDMPNVISKLESTGNTRILLTERGTSFGYNTLVTDMR
SLPQMANSGYPVVMDATHSVQQPGGQGASSGGQREFAPVMARAAVSLGIAAVFIETHENP
DHAPSDGPNMIPLNKMPALVRSLMSFDTLAKSDPARL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactatcaatatctccggtttgcgtgttggcaatgaccaaccactcacactcatt
gccgggccgtgccagatggaaagtagggagcacgccctaatgatcgcgcgcgagatgaag
tctgcgtgtgacgcagccggagcgcagtatatcttcaaggcgtcgtttgataaggccaac
cgcacctcgctttctggcaaacggggtgtggggcttcaggagggtttggacatcttgcaa
accgtcaaggatgacgtgggcgtgccagtgctgaccgacattcatttgcccgaacaatgc
gcgccagttgcgaaggttgtagacgtccttcagatccctgcctttttgtgccgtcaaact
gatcttctgttggcggcaggagaaacgggtgcagccataaacgtcaagaaaggacagttt
ctggcaccctgggacatgccgaacgtgatctccaagctagaaagcactggcaatacacgc
attcttttgaccgaacgcggcacgtcatttggctacaacaccctggtcaccgatatgcga
tccttgccacaaatggccaattctggataccccgttgtcatggacgccacgcattctgtg
caacaaccaggcggccaaggagcaagctcaggcgggcaacgggaatttgcgccggtaatg
gcgcgcgccgcggtgtcgcttggcatagcagccgtttttatagaaacccacgaaaacccc
gatcacgcaccgtccgatgggccgaatatgatccctttgaataaaatgcctgctcttgtg
cggagtttgatgagttttgacacgctggccaaatcagacccggcgcgcctttga
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