Ruditapes philippinarum (Manila clam): 132713032
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Entry
132713032 CDS
T09557
Name
(RefSeq) WASH complex subunit 5-like
KO
K18464
WASH complex subunit strumpellin
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132713032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132713032
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Others
WASH complex
132713032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Strumpellin
RIN1
Motif
Other DBs
NCBI-GeneID:
132713032
NCBI-ProteinID:
XP_060551455
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MADFLAENNQCGQNALRLASRGNAIIAELLRLSDFIPSVFRLETQQEVAKYGELVADFSY
FKSADYFENKIETKTELQDLDEEFRENHIEILTRFYQAFSSVHKYVTDLNRFLEDLNEGV
YIQQTLESVLLNNDGKQLMCEILFLYGVMLLIIDMKIEGTIRERMMVSYYRYSAQKASAG
DSNIDDVLKLLRSTGYSSAAGAKRPPNYPESFFARVPIDDEFINMVIGRLRSDDIYNQIA
SYPLPEHRSTALGTQASMLYILLYFDPEILTNQPAKMREIVDKHFPDNWVVSVYMGITVN
LLDAWSPYKAAVTALNNTLDQSNVRELSIKYATKVTKLHPVLDKYLKEGVLVEEFILDSI
PKLLNVMRDSNVTLRWLMLHTCALSPSAEANKRCKQLRDQVLSDSKYSPLAVFQLLLNTA
QFEFKLKEMFKQMLEEKKNKWEVYKKEGTERIQELSDVFSGTKPLTRVEKNENLQAWFAE
MAKQIDSLNYDDSTSAGRKIVQLIQALEEVQEFHQLESNLQVRQFLADTRKYLHQMIRTI
NIKEEVLIAIEIVADLSYAWEIIDSYTSYMQQGIKRDPTLVIKLRATFLKLSSALELPCL
RINQAQSSDLMSVSQYYSGELVAYVRKVLQIIPQTMFSQLAKIITLMTSQIREVPTRLEK
DKMKEFAQLEDRYQVAKLTHSISVFTEGIMMMKTTLVGIIKIDPKQLLEDGIRKELVQQV
AKALHNTLQFNPKAKVNELIPRLHNLGEQMEGFRRSFEYIQDYVNIYGLKIWQEEVSRIV
NYNVEQECNSFLRTKVQDWESVYQSTAIPIPRFRPVDESVNFIGRLAREVIRITDPRTAA
YIDPMKAWYDIKTKQEIVNKTLFSKIQKAVGTFGLTGLDRLLCFMIVKELQNFNRLLERQ
VFRTKDKLWLLMLEDLSKSLTPVQSIVGNPLKYYGAYVSKSSKLWPQYFEIMLKVGQVQL
LRKQIAHELNTLCKFDSNNLACALQTLNNGLMTDIEAHYADPTKPYPKEENPLMYELTGY
LEASGFHNPLMKIYITTKPVPHVPVFIFLLVISHIPKLTYNKAIGGLVCKKPTDPLDAPP
FVMAV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttttagcagaaaacaatcaatgtggccagaatgccctgcgacttgcttca
agaggcaatgcaattatagcagagttacttcgactatctgatttcattccatctgtgttc
cgcttagaaacacagcaagaggtggccaaatatggtgaactcgttgcagatttcagctac
tttaaaagtgcagattactttgaaaataagatagagacaaagacggaacttcaagactta
gatgaggaattcagagaaaatcatattgagattttgacaagattttaccaagccttttca
agtgtgcataaatatgtgacagatcttaatagatttttagaagacctaaatgaaggggtg
tatatacagcaaacactagagagtgtgttactaaataatgatggcaaacaacttatgtgt
gaaatattgttcctgtatggtgtaatgctcctcattattgatatgaagatagaaggaaca
attagagagagaatgatggtctcctactatagatacagtgctcagaaagcatcagctgga
gattcaaacattgatgatgttcttaagctactcagaagtacaggatactccagtgcagca
ggtgcaaagagaccaccaaactatcctgagtctttctttgcgagagtacctatagatgac
gagtttatcaacatggtgattggtcggctgaggtcagatgatatatataaccagatagcc
tcataccccctaccggaacatcgctcgacggcactgggcacacaagctagcatgttgtat
atactgctatactttgatccagagatactgacaaaccaacctgctaaaatgagagaaatt
gtcgataaacattttccagataattgggttgtaagtgtgtacatgggtataacagtgaac
ctactggatgcttggagcccatacaaagcagcagtcacagcacttaacaatactctagac
cagagtaatgttcgagaactgtccattaaatatgcgaccaaagtaacaaaactacaccca
gtattagataagtacctaaaggaaggagttttagtagaggagtttatactggacagtata
cctaaacttctcaatgtcatgagagatagtaatgttactctacgctggctgatgttacat
acatgtgctctctctccaagtgctgaagcaaataagagatgcaaacagcttagagatcaa
gttctttctgacagtaaatatagtccactagcagtgttccaacttcttcttaatacagct
cagtttgaatttaaactgaaagagatgtttaagcagatgctggaagaaaagaagaacaag
tgggaggtttacaagaaggaaggaactgaacgaatacaggagctcagtgatgtcttctct
ggtactaaaccattaaccagggttgagaaaaatgagaacttgcaagcctggtttgctgag
atggccaaacagatagactcgttgaattatgatgattctacatcagcaggaaggaaaatt
gtacaacttatacaggccttagaagaggtacaagaatttcatcagttagagagtaatcta
caagtacgtcaattcctggcagatactcggaaataccttcaccagatgatacgtacaata
aacattaaagaagaagttctcattgccattgagatagtagcagacctgtcatatgcatgg
gaaattattgacagttacaccagctatatgcagcagggcattaagagagatcctactcta
gtcattaaacttagggctacattcttaaagttgtcatcagctctagagttaccatgtcta
cgtatcaaccaagctcaaagttctgacttgatgagtgtctcacaatattactctggtgaa
ttagtagcctatgtcagaaaagtcttacagattatcccacaaactatgttcagccagctg
gctaagattattacattgatgaccagtcagattagagaggttcctaccaggctggagaaa
gacaagatgaaagaatttgcccagttagaggacagatatcaggttgccaagttgacacac
tctatatcagttttcactgaaggtattatgatgatgaaaactactttagtaggaattata
aagattgatccaaagcagttattagaggatggtataagaaaggaacttgtacaacaagtg
gccaaggcactacataatactctacagtttaacccaaaagccaaggtgaatgagctgata
ccacgacttcacaatcttggtgaacagatggaagggttcaggaggtcgtttgagtatata
caggattatgtgaacatatatggactgaagatatggcaggaagaggtgtccaggatcgtt
aattataatgtagaacaggagtgtaacagtttcttaagaacaaaggtacaagattgggag
agtgtgtaccagtctacagctattcctataccaagatttcgaccagtagatgagagtgtc
aattttataggaagacttgccagagaagttatacgtataacagatccgaggacagcagca
tatattgatccaatgaaagcatggtacgacatcaagaccaaacaagaaattgtcaacaaa
acactcttttctaaaatacagaaagctgttggaacatttggactgacaggtttagataga
ttgttgtgtttcatgatagtgaaggaactacagaacttcaacagattgttagagagacaa
gtgtttagaactaaggataagttatggctactcatgttagaggacttgagcaagtcattg
acaccagtacaaagtattgttggaaatccattgaaatattatggtgcatatgtgtcaaag
tcttcgaaattatggcctcagtactttgaaatcatgcttaaggttggacaagttcaattg
ttaaggaaacaaattgctcatgaactgaacacattgtgtaaatttgactcaaacaatctg
gcctgtgctttacaaacactcaacaatggcctgatgacagatatagaggctcactatgct
gatccaacaaagccctatcctaaagaagagaatcctctcatgtatgaactgacaggttat
cttgaagcttcaggtttccataaccctcttatgaagatttacatcacaacaaaaccagtg
ccacatgttccagtattcatctttctgctggtcatctcacacatccccaaactaacatac
aacaaagctataggtggcctggtttgcaagaagccaacagatccattagatgcccctcca
tttgtgatggctgtataa
DBGET
integrated database retrieval system
