Ruditapes philippinarum (Manila clam): 132713154
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Entry
132713154 CDS
T09557
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132713154
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
132713154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
HTH_SB
DUF6115
HTH_28
Motif
Other DBs
NCBI-GeneID:
132713154
NCBI-ProteinID:
XP_060551616
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MTMSTMEDKQLSSTKEEDSSSGENGGVNSLSKKARSKRGHSGINQLGGMFVNGRPLPDST
RQRIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATGDVCR
HVAQYKRECPSIFAWEIRDRLLADGVCNQENIPSVSSINRVLRNLATENQKVIGQGSMYD
KLGLLNGQAWARPNPWYPNMGMHSIGTSSYHQPPPSHLDIEKKHNDGNSSSDSNHSDGAK
GSENDEQMRMRLKRKLQRNRTSFTASQIEALEKEFERTHYPDVFARERLAQKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRDPGNGSSRIHPLNTGFPNSMYPSLQTISQMGSPDQYSA
MPSVQNYSLNNNMPSNPSCLQSSSSPYSCMIPDYSGRSYDPLSLSAYSRSSCSAVAAASS
IPSHVTHNTHNGASPTGLISPGVSVPVQIPGGGHQDMGVHHMTSMTSQYWPRIQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtccacaatggaagacaaacagttatcctcaacaaaggaggaggactcttct
agtggtgagaacggaggtgtgaacagccttagcaagaaagcaaggtcgaaacgaggtcat
agtggaattaaccagcttggaggaatgtttgtaaacggtcgccctcttccggattcaact
agacaaaggattgtagagttggcccacagtggagcaagaccatgtgacatttctagaatt
ttacaagtatcaaatgggtgtgttagtaaaattcttggacgttattacgaaaccggttct
ataagaccacgtgcaataggtggaagtaaaccacgtgtcgctacaggagacgtttgtaga
catgttgcgcaatataaaagagagtgtccctcaatatttgcatgggagataagagaccga
ctgctagctgatggtgtctgtaatcaagaaaatattccaagtgtgtcttctataaacagg
gtgttacgcaacctagcaacagaaaaccaaaaggtgataggtcaaggcagcatgtacgat
aaattaggtcttctcaacggtcaagcttgggcaagacccaacccctggtacccaaacatg
ggcatgcatagtataggaacaagctcttaccatcaaccccctccaagtcatcttgatata
gaaaagaaacataatgacggaaactccagttcagacagtaaccatagcgatggtgccaaa
gggtcagaaaatgatgaacaaatgcgcatgcgccttaagagaaaattacagaggaataga
acttcatttacagcatcgcaaatagaagctttagaaaaagaatttgagagaacgcattat
cctgatgtatttgcaagagaacggttagcacagaaaatagaccttcccgaagctagaata
caagtatggttttcaaatcgacgcgcaaaatggcggcgggaagaaaaacttcggaatcaa
cgaagagatcctgggaacggttcatctcgtatccatccactaaatactggattcccaaat
agcatgtatccatctctacagacaatatctcaaatgggttcaccagaccaatatagtgca
atgccaagtgtgcagaattattccctgaacaacaatatgccatcgaatccgtcttgtctt
caatcttcaagttcaccatattcatgtatgattccagattactcaggacggagttatgac
ccactttccctcagtgcctactcgagatcctcgtgcagtgctgttgcagcggccagtagt
atcccaagtcacgtgactcacaatacgcataacggtgcgtctccgactggattgatctca
ccgggtgtgtcagttccggttcaaatacctggtggaggtcaccaagatatgggcgttcat
cacatgacctcaatgacgtcacaatattggcctcgtatccaatga
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