Ruditapes philippinarum (Manila clam): 132713223
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Entry
132713223 CDS
T09557
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rphi03012
]
132713223
Translation factors [BR:
rphi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132713223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
CLU_N
TPR_NPHP3
TPR_MalT
GSKIP_dom
ubiquitin
Msb1-Mug8_dom
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
132713223
NCBI-ProteinID:
XP_060551695
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MAGIPGSESDERKHQSTQKKSENENPTDSKDAESLNGDVEVVRMNGETEHMNGGMESPDK
EVNGEKEEQTDKDGEKEGEENKDQEVLLIQDTGFNVTITCPGVEEFELPVSSMELVQEIH
QVLMDREDTCHRTCFSLQLDGQTLDNFAELKSIEGLKEGSVIKVVEEPYTIREARIHLRH
IRDLLKSVDPGDAYAGVDCNSVSFLNIITAGDILEKKHKDSLDCTPPDYIMPGSKERPLL
PLHPNIKELKTPPCLKVLTLSGWNPPPGNRKLHGDLIYLYAVTLEEKKYHITASTRGFYV
NQCTEDIFNPKAAAQKFLSHTLIELLNQLSPAFKRNFSMLLKKRGQKHPFERVPTPYQVY
TWMAPLQEHTVDYIRAEDAFSTRLGYEEHIPGQTRDWNEEIQTTRELSRKALPERLIRER
AIFKVHSDFVAAATRGAQSVIDGNVMAINPGDEAKNQMFIWNNIFFSLGFDVRDHYKDFG
GDFAAYAAPGNDLQGVRAYFNTDIEGMYTLGTVVVDYRGYRITAQSIIPGILEREQEQSV
VYGSIDFGKTVVTNDKYKELLQKSASQLKIRPHKVLNEKEEEVELYSSIECKGIVGNDQR
HYVLDLLRTFPPDVNFSEVSPDELSNDMRNHGYPLKHRHKLCCLRQELVEAFVENRYVAF
VRTAAYHFQQMQIHKKASQDLEKESKLKAISAATKTVVPGEKEKSDDKDMAEAETEEAKK
IVEALTDKENQTVEESSKDIVKKAAKAVGSLSETEFNLTFNPDVFQEHVKHADPESAVLQ
KERQAVKEAAEFLVLHQIPTLVNDCLDHSSPPIDGATLTEAMHTRGVNMRYLGKLAETVS
KYKSVSYIYTICIAEMITRAAKHLYKIHMQGIDQTTLSAAISHFLNCLVGSFPTPHPGVS
VDEGKGTRKKNKRRNKGIAISIDNTEWVNETPKSLWKKIIDEVDEYFHYTLECDSIDSAV
EKYGIQKVSLLRSFCQCVGVQILLREYNLEIRSRAIFAEDDIVNVFPVVKHIHPRASDAY
HFFSSGQSKIQQGSLKEGYDLICEALNLLNNVYGAMHPEIAACLRLLARLNYIMGDYPEA
MSYQQRAVLMSERVLGIDHPNTITEYAHLALYCFANNQVSSALRLMYRTRYLALLCHGEN
HPETGLIDSNIGLILHAVEEYDRSLTFLEHALQLYQRFYGSKSLKVAMSYHLVARTHSCR
GDFRAALNSEKEAYTIYRQMLGEEHERTKESGECLKHLTQQAVVFQKKMNEIVKGEKVTS
LAGLQIQTPSMHSVMEMLNVINGIVFVQISPDEIERLRKEIGKKPEQKAGEKDSESKASD
SGNESDNVNSPEKDDLAKTEKQLINGEVHVEEIAVGH
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggctggaattcccggatccgaatccgacgaaaggaagcaccaatctactcagaaaaag
tctgaaaatgaaaacccaacggacagcaaagatgcggaatcgttaaatggcgacgttgaa
gttgttagaatgaatggtgaaactgagcacatgaatggcggcatggaatctccggataaa
gaagtgaacggagagaaagaagaacaaacagataaggatggagagaaggaaggtgaagaa
aacaaagatcaagaagtgctcttgatacaggacactggttttaatgtgacaattacatgc
ccaggtgtggaggaatttgagctaccagtgagttccatggagttggtacaagagattcat
caggttctgatggaccgtgaagatacgtgtcacaggacatgtttctctctacagctagac
ggacagacattagataactttgctgaattaaaaagcattgaagggttgaaagagggttca
gttatcaaagttgttgaagaaccatacacaatacgcgaggcacgtatacatttgagacat
atccgagacttgttaaagtccgtcgacccaggagatgcctacgctggtgtggattgtaac
tcggtgtccttcctcaatataatcaccgctggagatatccttgaaaaaaaacacaaagac
tccttggattgcacaccccctgactatatcatgccaggtagtaaagaaagaccgttacta
cctctacacccaaatatcaaagaactaaagactcctccttgtttgaaagttttgacactt
agtggatggaatcccccacctggaaacaggaaactgcatggagatttgatatatctctac
gcagtaaccttagaggagaagaaatatcatatcacagcatcaacccgtggattctatgtt
aaccagtgcacggaagacatattcaaccctaaagctgcggcacagaaattcttgtcacat
acattgatagaactactgaatcaattgagtcctgcattcaaacgtaatttctcaatgtta
ctcaagaaacgtggacagaagcacccgtttgagcgtgtacccactccctatcaggtttac
acatggatggcaccactccaggaacatactgttgactacattagggcagaagatgctttt
tctacacgactcgggtatgaggaacatattcctggtcaaacaagagattggaatgaagag
atacaaacaacgagggaactctctcgtaaagccctgccagaaaggcttatcagagaaaga
gctatatttaaggtacacagtgattttgttgcggcagctacaagaggtgctcagtccgtt
attgatggtaatgtgatggcaatcaatcctggagatgaggccaagaatcagatgtttata
tggaacaacatcttcttcagtcttggttttgatgtcagggatcattataaagattttggc
ggagattttgctgcttatgctgcaccagggaatgacctgcaaggtgtgagagcctatttt
aacacagatattgagggaatgtatacactaggtacagtggtcgtagattaccgtggttac
agaattacagcacaatcaattataccaggtatattagagagggagcaggagcaatcagtg
gtttacggttcaatagattttggaaaaactgttgtcacaaatgataaatacaaagaattg
ttacaaaaatctgctagtcaactaaaaataagacctcacaaggtattgaatgagaaggag
gaggaagtggagttgtattcatctatagagtgtaagggaattgtgggtaacgatcagaga
cattacgttctagatctgctgaggacgttccctccagatgttaacttttctgaagtttca
ccagacgagttatctaatgatatgagaaatcatggttatcctcttaaacacagacacaaa
ttatgttgtcttagacaggaacttgttgaagcgtttgtagaaaatcgttacgtagcattt
gtacgcactgcggcctaccactttcaacagatgcagatacacaaaaaagcctctcaggac
cttgaaaaagaatcaaaacttaaggcaatctcagcagcaacaaagacggttgttccaggt
gagaaggagaaatctgatgataaagacatggccgaggctgagacagaggaagctaaaaaa
attgttgaggcccttactgacaaagaaaatcaaacagttgaggaaagcagtaaggatata
gtcaagaaggcagctaaagctgtaggatctcttagtgaaactgagttcaatctgaccttt
aaccccgatgtctttcaagaacatgtcaaacatgctgatcctgagtctgcagtattacag
aaagagagacaagcagtgaaagaggctgctgagttcctagttctgcaccaaatacctact
cttgtaaatgattgcctagatcactcatctccaccaatagatggcgccacgttgacagaa
gcaatgcacactcgtggtgtaaacatgcgctacctgggcaagcttgcagagactgtatcc
aaatataaatctgtttcttatatctatactatatgtattgcggagatgatcacacgtgca
gccaaacatttatacaagatccacatgcagggaatagatcagacaacactatctgctgct
atcagtcatttcttgaactgcctggttggatccttcccgacaccacaccctggagtctca
gtggatgagggtaaaggaacaagaaagaaaaataagagacgtaacaagggtatagctatc
agtatagataacacagagtgggtcaacgaaacaccaaaatcattgtggaagaaaatcatt
gacgaggttgacgagtatttccactacacactagaatgtgattcgattgactcagcagta
gagaagtacggaatacagaaagtgtcactactacgttcattctgtcaatgtgttggtgta
cagatcttgttacgagagtataacctcgagattagaagtcgggcaatcttcgctgaagat
gatatagtcaatgtctttccagttgttaaacatattcaccccagggcatcagatgcttat
cactttttctcaagtggtcagtctaagatacagcaaggatcacttaaggaaggatatgac
ctgatatgtgaagctctcaatcttctcaataatgtgtacggagccatgcatccggagatt
gctgcctgtctacgtcttctcgccagattgaattatatcatgggcgattatccagaggcg
atgagctatcagcagagagccgtgttgatgagtgaacgagtgctcggaattgatcatcca
aacactatcacagaatatgcacatcttgcgctgtactgttttgctaataatcaagtgtca
agtgctctacgtctgatgtacagaacacggtacctggctctgctttgtcacggtgaaaat
cacccggaaactggtctcatagatagtaacattggattgatattacatgctgttgaggaa
tatgatcgttctctgaccttcctagaacatgccttacaactttaccaaagattttatgga
tcaaagagcttgaaggttgccatgagttaccatttggttgctaggacacactcttgccgc
ggagatttcagggcagcattaaacagtgaaaaggaggcatatacaatctatagacaaatg
ctgggagaggagcatgaaagaacaaaggaaagtggcgaatgcctcaaacatcttacacaa
caagccgtcgtcttccagaaaaaaatgaatgaaatcgtaaagggagaaaaagtcacatcc
ctggctggtttacagattcaaactccgtccatgcacagtgtaatggagatgttgaatgta
atcaatggaatagtttttgtacaaattagtcctgatgaaattgaaaggctcagaaaagaa
atcggaaagaaaccagaacaaaaagcgggagaaaaagattcagagagtaaagctagtgat
agtggtaacgaatctgacaatgtcaattccccagaaaaagacgatcttgccaaaactgaa
aaacagttgataaatggcgaggtacatgtggaagaaatcgccgtcggacattga
DBGET
integrated database retrieval system
