KEGG   Ruditapes philippinarum (Manila clam): 132713336
Entry
132713336         CDS       T09557                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132713336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rphi03041]
    132713336
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132713336
Spliceosome [BR:rphi03041]
 Complex B
  Other components
   Prp19 complex
    132713336
 Complex C
   Prp19-CDC5 complex
    132713336
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    132713336
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 132713336
NCBI-ProteinID: XP_060551869
LinkDB
Position
Unknown
AA seq 805 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWARIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIVGRTAAQCLEHYEYLLDKAQNRDESEDDPRRL
KPGEIDPNAETKPAKPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLA
ALQKRRELRAAGIEIKKKSRRKRGVDYNAEVPFEKKPAPGFHDTSEENYDPLDPNFKRLR
QQDLDGERRDAKEERERRKDKDKQKKRKESDLPGHIAGQSNFQEPVKKRSKLVLPSPQIS
ETELEEVVKVGYASENARAQAEESGMQNGATQSLLQDYSVTPGSSALRTPRTPALASDVL
MQEAQNIMALTNVDTPLKGGLNTPLHNSDFSGATPQARNIQTPNTVLGTPFRTPGPAEDG
GMTPHGLTPMITQNGQLGVTPLRTPMRDKLNINQGDDFESGSFEQQDPRDQLKRGLAGLP
QPKNDFEILVPEDMNEEGDEIGDQHQYIEDQAEIDARSEADRRARMEKELKLQSHSVQRD
LPRPYDVNENILRDVGPGDPALTDLQKAEELVKREMLIMLHNDAAYNPTEFQLGITPGSK
KNQPSQKSVANQAAHIAFLKDHPLKKVTEDEIEQARELLHQEMEVVKRGMGHGDLSLEAF
SQVWDECYSQVLYLPSQGRYTRANLASKKDRIESLEKRLENNRSYMTKDSKKAAKLEKKL
KILLGGYQSRSQGLYKQVSELHEQLEHTYVELTTFENLRQHEVGAIPKRMESLTEDVVRQ
TERERELQKRYSDLQFRMSLLQVTK
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgcctcgtattatgataaagggtggtgtttggagaaacactgaggatgagatactgaag
gcagctgttatgaaatatggcaaaaatcagtgggctagaattgcatcattgttacataga
aaatctgccaaacagtgcaaggctagatggtatgaatggctggatcccagcatcaagaag
accgaatggagccgggaagaagaagagaagttattacatttggccaaacttatgccgaca
cagtggcgtactatagccccaattgtaggacgtacagcagcacaatgtttggaacattat
gaatatttactagacaaagctcagaatcgtgatgaaagtgaagatgacccgcggaggctc
aaacctggagagatcgaccctaatgcagaaactaaaccagccaaaccagatcctattgac
atggatgaagatgaattggagatgttatctgaagctagagcgaggttagctaacacgcag
ggtaagaaagctaagaggaaagctagagagaaacagctggaggaggcccgacgattagct
gcgttacagaaacgtagagaacttcgtgctgcaggaatagaaatcaagaagaaatctaga
agaaagagaggtgtagattacaatgcagaagttccttttgaaaagaaacctgccccaggg
tttcatgacacatctgaggaaaactatgatccattggacccaaacttcaaacgtttacga
caacaagatttagatggtgagagaagagatgctaaggaagagagagaaagaaggaaagat
aaagacaaacaaaagaagagaaaagaaagtgatttacctggtcatatagctggacagagc
aatttccaagagccggtaaagaaaagaagtaaacttgtgttaccatcaccccagatctct
gaaacagagttagaagaggtggtaaaggtaggatatgccagtgagaatgctcgagcccag
gccgaggaatccggcatgcagaatggagccacacagagtctgttacaggattactctgtt
acaccaggaagctctgcgctccgtacacctagaactccagctctcgcttctgatgtttta
atgcaggaagctcagaacatcatggctttaacaaatgtggacacccctctgaagggaggt
ctgaacactcctctacataactcagactttagtggagccacacctcaggctagaaatatc
cagactcctaatacagtgctaggtacacctttccgaaccccagggcctgcagaagatggt
ggtatgacccctcacggattgacacccatgataacacagaatggacagctaggtgttaca
cctctgagaacacctatgagagataaactcaacataaatcagggtgatgactttgaatca
ggatcttttgaacagcaagatcctagagatcaactgaagagaggtttagcaggactacca
cagccaaaaaatgattttgagatactggttcccgaagacatgaatgaggaaggggatgaa
attggggaccagcaccagtatattgaagaccaggcagaaattgatgctcgctccgaggcc
gacagaagagctcgaatggagaaagaattaaagttacagtcacattcagtacagagggat
ctgccgcgaccatatgatgtcaatgagaatatattgagagatgttggtccaggtgaccct
gccctaactgatctacagaaggcagaggagttagtgaagcgtgaaatgttgattatgcta
cataatgatgctgcatacaatccaacagagtttcagctgggtatcacacctggctccaag
aagaatcagcccagccagaagagtgtagctaaccaggcagcacatatagctttccttaaa
gatcatcctctaaaaaaagtaacagaggatgagatcgagcaggcgagagaattgttacat
caggagatggaggttgtaaagcgtggtatgggacatggtgacctgtcattagaggcgttc
tctcaggtctgggacgaatgttactcccaggtgttatatctaccatcacagggcagatat
accagggcaaacctggccagtaaaaaagacaggatagaatctctcgagaaaagacttgag
aataacaggtcctacatgacaaaagattccaaaaaagctgccaaacttgaaaagaaattg
aaaattttattgggaggttatcagtctcgaagtcaaggtttatataaacaagttagtgaa
ttacatgagcaacttgaacacacgtatgttgagttgacaacatttgaaaatctacgccaa
catgaagtgggagccatacctaaaagaatggagtctttaacagaggatgtggtacgacag
acggagagagaacgtgaattacagaaacgttacagcgacctccagttccgcatgtcctta
ttacaagtcacaaaatga

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