Ruditapes philippinarum (Manila clam): 132713384
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Entry
132713384 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 1-like
KO
K20288
conserved oligomeric Golgi complex subunit 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132713384
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
132713384
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS51_Exo84_N
Dor1
Motif
Other DBs
NCBI-GeneID:
132713384
NCBI-ProteinID:
XP_060551941
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MSKNETKSLPVHEMDTNILFEKYSVDEIRDIEKRTRADIERKKEDLRTMVGERYRDLIEA
ADTIAEMKNSAEKVMSTIGRIETLCTELKHNQMVKSSSLQLKKKQEIEIRRKEEAKFHEV
ASQIKLLLDIPEKMWTCLDCEDYLSASRLYLLAQHINTSLQLTSQNAPNFLYWFPVLNRQ
WAAISHFKITILQGCRRLIKETTVSDQKIADSLCSILLLENSNPRQVFNEFLLARTSAIQ
QLFHVNSDSLGTKEQICTVVQLITTTIHQIYAVFYTAEGQDTSDDTECTNLLLRTLTKVT
TQKQHESGLLDLHSSVSARCLPTSVTDFCPSHKSVSLGVSQQHLHDNCTQWIQTCINDVK
SGVTTLLNFVNTVKHLASIRDTVWELMSQDISLKDWTVVCESVLSNSLHIWDDLLRPLFV
DRVKALIKYQLEATVEITERQMNKVIVELDDENSSRLCVDTDLAGYIWSESPGDIAANTA
WGMAGSRSLLESGGLMMKAKAYTPIVQTFCKTFDGELDAVSEDYKFYIFTDAETMSVAIE
TTPFNQSSVSTSLLTFVQTSCMECVQGILEFLTKLLDDCRADLSSSKLRCSNIGNKLLLS
GRLCAAMCDLTPHLQQCMMGSEQVSRMDRSLLKRSTSGRHVIGKQESNVIWENIKSQLIK
YQQTAFRLWIDHVIEVGLGQFTMAVNAVTPAELIATCSRWDEVSIEEETEDGKKIMSKIS
VPMQASWYMMSLLYSLCNDLNNIGGHAVARSVLEHLVCSLSDGIINTYKALLNQSSTDKE
HCVNQQRALQLIFDVKFLRMIIPRKDDSPESKRYQKTIEEVLTRLEEIVDPFDLDVFSPF
MQANLTKVLQRSAVLLGGLTSLDKSGLYGLTTRPAPSSQQEQHNVLMLSTCHSRFSLLPL
SVQQSRMGVPQPVISQTLYRGGETSGPSLAETAAAVLPHNVQQKMNTSSSFYDRIGSMSD
ISNWFSNIAHKS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaacgaaactaaaagtttgccagtccatgaaatggacacaaatatattattt
gagaaatattcagttgatgagattagggatatcgaaaaaaggacaagagctgatattgaa
agaaagaaagaagatttaaggaccatggttggtgagaggtacagggacttgatagaagca
gctgataccatagctgagatgaaaaatagtgcagagaaagtgatgtcaacaataggacgg
attgagacactctgtacagagttgaaacacaaccaaatggtgaaaagttcttctctacag
ctgaaaaagaaacaggaaatagaaataagaaggaaggaagaagcgaagtttcacgaggtt
gcctcacaaattaaacttctactggatatcccagagaagatgtggacatgtctagactgt
gaggactatttatcagccagcagactgtatcttctagctcaacatatcaataccagtcta
cagctcacctcccagaatgctcccaacttcctgtactggttccctgtgctcaatagacag
tgggccgccatcagtcactttaaaataaccatactgcagggttgtagaagactgataaaa
gagaccacagtatctgatcagaaaatagctgacagtttgtgttcgattttgttgctggag
aactctaatcctagacaagtgtttaatgaattcctcctagctagaacatctgctatacaa
cagttgtttcatgtgaacagtgattcactgggaactaaggaacagatatgtacagttgtt
cagttgattactacaaccatacatcagatctatgctgtgttttatacagctgagggacaa
gataccagtgatgacacagaatgcacaaatctgttgttgagaaccctcacaaaagtgacc
acacagaaacaacatgagagtggtttattagatttacacagctctgtctcagctagatgt
ttgccaacatctgttacagatttttgtcccagtcataagtcagtctcactgggtgtatca
cagcagcatctccatgacaactgtacacagtggatacaaacgtgtataaatgatgtgaag
tccggtgttactacactattgaattttgtaaatactgtgaaacatcttgcctccatcaga
gatacagtgtgggagcttatgtcacaggatataagtttgaaggattggacagttgtatgt
gagagtgtcctcagtaattctctacatatctgggatgatctcctacgcccactctttgtt
gacagagtcaaggctttgataaaatatcagttggaagctacagttgagatcacagaaaga
caaatgaataaagttatcgtagaactagatgatgaaaatagcagccgactatgtgttgat
acagatctggccggatatatctggtcagagagtccaggagacatagctgctaacactgcc
tggggtatggcagggtcaaggtcattgctagagagtggaggtctgatgatgaaagcaaag
gcttatactcctattgtacaaactttctgtaagacgtttgacggagaactagacgctgtc
agtgaggattacaagttctacatcttcacagatgccgagacaatgagtgttgccatagaa
acgacaccattcaaccagtcctctgtttctactagcctgcttacatttgtacagacatca
tgtatggaatgtgtacaaggaattttagagtttctaaccaagttactggatgactgcaga
gctgatttatcttcatcaaagctgagatgttcaaatattggtaacaaactgttattatca
gggagactgtgtgcagccatgtgtgaccttaccccacacttacagcagtgtatgatggga
agtgaacaagtctctagaatggatagatctttgttaaagaggtccacatcaggaaggcat
gttatagggaaacaagaatctaatgtcatctgggaaaatattaaatctcaactcataaaa
taccagcagactgctttcaggttatggatagaccatgtgatagaggtaggacttggacag
tttacaatggcagtcaatgctgtaacacctgcagagctgattgcaacttgttccaggtgg
gatgaagtatctatagaggaagagactgaagatggcaagaaaatcatgtctaaaatatca
gttcccatgcaggcttcctggtacatgatgtcattattgtacagtctgtgtaatgattta
aacaatattggtggacatgctgtagccaggagtgttctggagcacctggtgtgtagtttg
tcagatgggataattaacacatataaagcattgttaaaccagtcgtcaactgataaggaa
cattgtgttaaccaacagagggcgcttcaacttatctttgatgtgaagtttttacgtatg
atcatacccaggaaagatgatagtccggagagcaagaggtatcagaagactattgaagaa
gttctgaccagattagaggagattgttgacccctttgaccttgatgttttctcaccattc
atgcaggcaaacttgactaaagtgcttcaaagatcagctgtgctactaggtggactgaca
agtttggacaagtcaggactgtatggacttacaacccggccggctcccagctcccagcag
gaacaacataatgtactcatgttgtctacatgtcacagccgattctcattgctaccacta
agtgtacaacagtcaaggatgggagtaccacaacctgtgattagtcagacactttacagg
ggtggtgaaacaagtggtccgagtctagcagagaccgctgcagctgtattaccacataac
gttcaacagaagatgaacacgagctcgtcattctacgatcgtataggcagtatgtccgac
atatctaactggttttctaacattgcacacaagtcatag
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