Ruditapes philippinarum (Manila clam): 132713422
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Entry
132713422 CDS
T09557
Name
(RefSeq) sodium-dependent proline transporter-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
132713422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132713422
Transporters [BR:
rphi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
132713422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
132713422
NCBI-ProteinID:
XP_060551998
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MSAQEYRKDDRSIEDRLAHIETQNNAIIDALQKKHKKHIFIGLEDENEERGNWSGRFDFF
LSCLGYAVGLGNVWRFPYLCYKNGGGAFFIPYVIMLAFVGMPIFFLELSLGQFSSSGPLT
CWKYAPLFQGVGVGMVAVSAMVAIYYNMIIGWSLYYLFASFTSELPWEKCDPEWATEMCL
DYIKKVDNAGACEMMEYHVNRTQGACYNKTTDKIAAIFDLALAKDNGIERQLPSEQYFER
KAIGNAFSDGLGDLGPMRWQMVLCYLLAFILVVLALSKSIKSSGKVVYFTATFPYIVLVI
LFVRGLMLDGYKEGIEFYITPKTDRLTDSVIWKDAAVQIFFSLSASWGGLIALSSYNRFH
NDCLRDAIAVSLGNCLTSVFAGFVIFSYLGNMSHELGVPIEDVARSGASLAFTVYPYAVT
LLPASPFWAIIFFLMLLTLGVDSQFVLVETVTTALMDRFIVLRKYKLLTVMVLCAIFFLL
GLTLTTNGGIYMLEVMDTYSGGWNIMFIAICECISLCYVYGIRRFLVDIETMIGYKVCGF
CPFIACKYWWALNWCVISPVIVLATMIFSWVKYTDMEGDEYPEWSDALGWLMTLTVIVAI
IGGALLALCSGEGSFTDRLRQATTPTVEWGPALVKHRSLVAKYVPGFVVDPWGKGGEVAP
DDIKLQMKEPSQVEQKTPNPSHTAQYQAQTAPGAYGPGAPVYVTYVE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcaagaatacagaaaggatgaccggtcgatagaagaccgtctagctcatatc
gagactcaaaataacgcaattattgatgcccttcaaaagaagcataagaagcatattttc
attggccttgaggatgaaaatgaagagagagggaattggtcaggcagatttgatttcttc
cttagttgccttggttatgctgtaggtttgggaaatgtttggcgtttcccgtatctctgc
tacaaaaatggaggaggtgcctttttcattccatacgtgatcatgttggcatttgttggt
atgcccatcttcttcttggagttatcacttggtcagttttccagcagtggtccactgaca
tgctggaaatacgctccacttttccaaggtgtaggagttggtatggttgctgtatcagct
atggttgccatctattacaacatgatcataggctggtcactctactatctgtttgcatca
tttaccagtgaattaccttgggaaaaatgtgatccagaatgggccacagaaatgtgcttg
gactatatcaaaaaggtggataatgctggtgcatgtgagatgatggaatatcatgtcaac
cgtacacagggagcatgttataataaaaccactgacaaaattgctgccatatttgacctg
gccttggcaaaggataatggaattgagaggcaacttccatcagagcaatattttgaacgt
aaagctattggcaatgcttttagcgatggtcttggggacttggggccgatgcgttggcag
atggttctatgttatttactggcttttattttggtagtattggcactcagcaagtccatc
aagtcatcaggaaaggttgtatatttcactgcaacattcccctatattgtacttgtcata
ttattcgttcgtggattgatgttggatggatataaagaaggaatagagttctatatcaca
ccaaaaactgatagactgacagactctgtcatttggaaagacgctgctgtccagattttc
ttctccttgtcagcatcatggggaggccttattgcactttccagttataaccgtttccat
aacgactgcttacgagatgctattgcagtatcacttggtaactgtctgaccagcgttttt
gctggttttgttatcttctcgtaccttggaaacatgtcgcatgaactaggagttccaatt
gaagatgttgcaagaagtggagcgtcccttgctttcaccgtatatccttacgctgtaacc
ctacttcctgcctcaccgttctgggcaatcattttcttcctgatgttgttgacacttgga
gtagattcgcagtttgtattggtagaaactgttacaacagctttgatggaccgcttcatc
gtacttcgtaaatacaaactgcttacagtgatggtcttatgtgccatcttcttcttgttg
ggtctgacactcaccacaaatggaggtatatacatgttagaggtgatggacacatattca
ggaggttggaacatcatgtttattgccatatgcgaatgtatctctctttgctatgtttat
ggtattcgtagattccttgttgatattgaaacaatgattgggtacaaggtatgtggattc
tgcccctttattgcatgcaagtactggtgggctctcaactggtgtgttatctcccctgtg
atcgtattggcaacaatgattttttcctgggttaagtacactgatatggagggtgatgaa
tatccagaatggtcagatgcccttggttggcttatgaccttgactgtcattgtggccatc
atcggtggggcactccttgctttatgttctggtgagggaagctttacggatagacttcgt
caggccactacaccaaccgtagaatggggacctgctcttgtcaaacacagaagcttggtg
gctaaatatgtaccaggttttgttgtagatccatggggtaaaggtggggaagttgcgcca
gatgacatcaagctacagatgaaagaaccatctcaagtagaacagaaaacccctaaccca
tcacatacagcccaatatcaggcacagaccgccccgggggcctatgggccgggcgcacct
gtctacgtgacttatgttgaataa
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