Ruditapes philippinarum (Manila clam): 132713477
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Entry
132713477 CDS
T09557
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132713477
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132713477
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132713477
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
132713477
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
132713477
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132713477
Prokaryotic type
Other AARSs
132713477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DDRGK
Motif
Other DBs
NCBI-GeneID:
132713477
NCBI-ProteinID:
XP_060552072
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSSFKLWPSLLKVLDKTVTKQLKYYHLKSAGLKAASAYAPDAYRVTLLSQTQKLHSTSLT
QTEFTSSELKRRLKEEKKAKEKAEKLAAQQETQKDAKKEDKIKEEDIDPNEYFKLRSRAV
ANLKGSNDNPYPHKFHVSMSLVEYIDKYKSVGDGTIMEDIIVTVSGRIHSRRESGAKLVF
YDLRAEAVKIQIMANAKYYESEDEFAKMLEKVKRGDIIGVEGMPGKTKKGELSIIPKKIV
LLSPCLHQLPSLHFGVKDKETRFRQRYLDLIINETTRNKFIVRAKIINYLRRFMDQLGFL
EVETPMMNMIPGGATAKPFITHHNDLNMDLYMRVAPELYLKMLIVGGLDRVYEIGRQFRN
EGIDMTHNPEFTTMEFYMAYADYNDLMTITETMVAGMVKEIHGSHKVQYHPEGPDGPVWD
IDFTPPFRRVSMIDELEKKLGVKFPDPANLNHSEVQKFLDDQCVKHNVDCTAPRTSARLL
DKLVGDFIEETCVSPTFIIDHPQVMSPLAKWHRAKSGLTERFELFVCKKEICNAYTELND
PVVQRERFQQQAQDKAAGDDEAMFVDESFCTALEYGLPPTAGWGMGIDRLAMFLTNSNNI
KEVLLFPAMKPEDKTVLENAPADS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcattcaaactgtggccaagtctactgaaagtgttggataaaactgtaactaaa
cagttgaaatattaccatttgaaatcggctggtttaaaagcagcaagtgcctatgctcca
gatgcctacagggttacactattgagtcagacacaaaaattgcattccacttcactgact
caaactgagtttacatcaagtgagttgaagagaaggttgaaggaggagaagaaggccaaa
gaaaaggcagagaaattagcagcccaacaagagacacagaaagatgctaagaaggaagat
aaaatcaaggaagaggatattgatccaaatgaatatttcaaattgcgatcaagagctgtt
gccaatttgaaaggcagcaatgacaatccatatcctcacaagttccatgttagcatgtct
ctggtagagtatatagacaaatacaagagtgtaggtgatggcaccatcatggaggatatc
attgtcactgtttcaggtagaatacattctagaagagaaagtggggctaaattagtattt
tatgatctccgagctgaagcagtgaagatacagataatggcaaatgcaaagtactatgaa
tctgaagatgagtttgctaagatgttagaaaaggtcaagagaggagatatcattggggta
gagggaatgcctggtaaaacaaagaaaggagagttgagtattataccaaaaaagatagtc
cttctgtcaccttgtttacatcagttgccatcattacactttggtgtgaaagataaggag
accagatttagacaaagatatttagatcttataataaatgagacaacaagaaacaagttt
attgtgagagccaaaatcatcaattatctcagacgatttatggaccagttagggtttctg
gaggtagagacaccaatgatgaacatgataccaggtggcgccactgctaaacctttcatc
acacaccacaatgacctcaatatggacctatatatgagagttgctccagaactttacctc
aaaatgttaatagttggaggtttagatagagtctatgagattggacggcagttccgaaat
gaaggaatagacatgacacataatcccgagttcacaacgatggagttttacatggcatat
gctgactataatgatctgatgaccatcactgaaactatggtggctggtatggtaaaagaa
attcatggttcacacaaggtgcaatatcatccagaaggtcccgacgggcctgtttgggac
atcgattttacacctccatttaggagagtcagtatgatagatgagctagagaaaaaatta
ggagtaaagtttcccgacccagctaaccttaatcattcagaggtacagaagtttttagat
gaccaatgtgtcaagcataatgttgattgtacagcacctagaacttcagctagattgtta
gataaacttgtaggagattttatagaagaaacatgtgtgagtcccacatttatcattgat
catccacaagtcatgagtccacttgctaaatggcacagagcaaagtctggtttgacagag
agatttgaattgtttgtgtgcaagaaggagatttgtaatgcttacacagagttgaatgac
ccagttgtacagagagaaaggttccaacagcaagctcaggacaaagcagctggtgatgat
gaggctatgtttgtagatgagtcattctgtacagcactagagtatggtctaccaccaaca
gctggctggggaatgggcatagatagactggctatgttccttactaactcaaataacatc
aaggaggttttgttgtttcctgccatgaagccagaagataaaacggttttagaaaacgca
ccagcagattcatag
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