KEGG   Ruditapes philippinarum (Manila clam): 132713579
Entry
132713579         CDS       T09557                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rphi03041]
    132713579
Spliceosome [BR:rphi03041]
 Complex B
  Other components
   Complex B specific factors
    132713579
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 NBCH_WD40 LisH_TPL Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_RFWD3 RMC1_N Beta-prop_BBS7 LisH_WDR26 Beta-prop_EIPR1 Mala_s_1-like Beta-prop_WDR11_2nd Beta-prop_IP5PC_F VPS8_N
Other DBs
NCBI-GeneID: 132713579
NCBI-ProteinID: XP_060552199
LinkDB
Position
Unknown
AA seq 522 aa
MQNINNSDFVIVLRLCFSVVRLIEQYLKENNLLKTLTVLQEESGISLNTVDSVDGFISDI
TSGHWDTVLQAIQSLKLPDQKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKHNQA
DRYIHLENMLARSYFDPREAYPEGQTKEKRRTAIALALSGEVNVVPPSRLLALLGQALKW
QQHQGLLPPGTTIDVFRGKAAVKEQEEEKYPTQLNKTIKFGQKAHIECAKFSPDGQYLVT
GSVDGFVEVWNFTTGKIRKDLRYQAQDNFMMMDDAVLCMCFSRDSEMLATGDQGGKIKVW
KILTGQCLRKFERAHAKGVTCANFSKDNGQLLSASFDQTIRVHGLKSGKTLKEFTGHGSF
VNDAVFTQDAHHVISASSDGTIKVWNFKTQECQSTFKSFGGQAGTDITVNSIHPLPRNAE
QFVVCNRSNTVVIINMQGQIVRSFSSGKREGGDFICCTISPRGEWIYCVGEDMVLYCFSI
STGKLERTLTVHEKDVIGISHHPHQNLLATYSEDGLLKLWKP
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgcaaaatattaataattcagactttgtaatagtattacgattatgtttcagtgttgtg
cgtttgattgaacagtatctgaaagaaaacaatcttttaaaaacacttacagtgttacag
gaagaaagtggtatatctctcaacacagtagactctgtagatggatttatctcagatatt
accagtggtcactgggacactgttcttcaggccattcaatcactcaaactgccagaccag
aaactaattgatctttatgagcagattgtgttagagttgatagagcttcgggaactggga
gcggccaggtcacttttacgacagacagatccaatgattatgttaaaacacaaccaagct
gatagatatatacatttagagaatatgcttgccaggtcctacttcgaccccagagaggcc
tacccagaaggacagacaaaggagaaaagacgtacagctatagctcttgccttgtctgga
gaggtaaatgttgtaccaccatcccgtttgttggccttgctaggtcaggcactaaagtgg
caacaacatcaaggtctcttacccccaggaacaacaattgatgtgttccgaggaaaggca
gctgtcaaagaacaagaagaagaaaaataccctacacagcttaataaaactattaagttt
ggtcagaaagctcacatagagtgcgccaagttctcaccagacggtcagtatctggttact
ggctcagttgatgggttcgtagaggtgtggaattttaccacaggaaaaattagaaaagat
ttacggtaccaggcacaggataattttatgatgatggacgatgctgtattatgcatgtgt
tttagccgagattctgaaatgttagcgaccggggaccaaggcggtaaaattaaggtttgg
aagatattgactggacagtgtctacgcaagtttgaaagagctcatgctaaaggagttaca
tgtgcaaatttctctaaagataatggccaacttctgagtgcctcatttgaccaaacaatc
agagtgcatggcctaaagtcaggaaaaacattaaaggagttcactggtcatgggtcattt
gtaaatgatgctgtgttcacacaagatgcacaccatgtgatcagtgccagttcagatgga
actataaaagtatggaatttcaaaacacaagaatgccagtcaacatttaaatcatttggt
ggtcaggctggcacagatattacagtgaacagtatacacccgctacctagaaatgccgaa
caatttgtggtgtgtaaccgtagtaacacggtggttattatcaacatgcagggacagatt
gtaaggagtttctcaagtggtaagagagaaggtggagattttatatgttgtacaatatca
ccgcgtggagagtggatctattgcgtaggagaagatatggttttatactgcttcagtatt
tctactggtaaactggagagaactctcactgttcacgagaaagatgtaataggtataagc
catcatccacatcaaaatctcctggctacatacagcgaggatggtttactgaagctctgg
aagccctga

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